RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SEMA3DO95025 777 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 ATE1O95260 518 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 RAF1P04049 648 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 ALDOAP04075 364 aaKnown RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 PORP16435 677 aaPredicted RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 S1PR1P21453 382 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 CTSSP25774 331 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 PEX19P40855 299 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 SERPINB8P50452 374 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 RPP38P78345 283 aaKnown RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 GUCY2DQ02846 1103 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 PLCXD2Q0VAA5 305 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 TRAF3Q13114 568 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 KEAP1Q14145 624 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 LTB4RQ15722 352 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 FRG2Q64ET8 278 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 VWA5B2Q8N398 1253 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 WFDC11Q8NEX6 87 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 MBD3L2Q8NHZ7 208 aaPredicted RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 SLC44A1Q8WWI5 657 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 OMA1Q96E52 524 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 TMEM41AQ96HV5 264 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 ALPK1Q96QP1 1244 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 FRG2BQ96QU4 278 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 HBEGFQ99075 208 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 TUBA1CQ9BQE3 449 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 OSBPL11Q9BXB4 747 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 RAB17Q9H0T7 212 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 ZBTB26Q9HCK0 441 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 DLL4Q9NR61 685 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 FARSBQ9NSD9 589 aaKnown RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 SLC12A4Q9UP95 1085 aa11.52□□□□□ -0.57
SKA1-205ENST00000494518 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.57
SKA1-205ENST00000494518 A0A1B0GTL3 188 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 CLCA1A8K7I4 914 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 H0Y3Z8 333 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 ICOSLGO75144 302 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 UGT2B11O75310 529 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 EPXP11678 715 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 CYP4B1P13584 511 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 OPRM1P35372 400 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 PTGDSP41222 190 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 CPA2P48052 419 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 ALDH9A1P49189 494 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 MAPK12P53778 367 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 MRPS35P82673 323 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 CAV1Q03135 178 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 MGAT2Q10469 447 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 IFT88Q13099 833 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 RCAN2Q14206 197 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 DEFB113Q30KQ7 82 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 NHSL2Q5HYW2 709 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 COMMD6Q7Z4G1 85 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 KIF18BQ86Y91 864 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 GCNT2Q8N0V5 402 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 OR7G1Q8NGA0 311 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 OR4F6Q8NGB9 312 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 OR52R1Q8NGF1 315 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 OR14L1PQ8NHC6 308 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 HGDQ93099 445 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 INTS12Q96CB8 462 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 KLHL29Q96CT2 875 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 SECISBP2Q96T21 854 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 RBM24Q9BX46 236 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 ANKRA2Q9H9E1 313 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 MAT2BQ9NZL9 334 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 XPR1Q9UBH6 696 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 PCTPQ9UKL6 214 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 CES1P1Q9UKY3 287 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 PLLPQ9Y342 182 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 PCDHA9Q9Y5H5 950 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 IKBKGQ9Y6K9 419 aa11.51□□□□□ -0.57
SKA1-205ENST00000494518 FN1P02751 2386 aaKnown RBP11.51□□□□□ -0.57
SKA1-205ENST00000494518 DSCAMO60469 2012 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 A0A1W2PPR1 153 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 C17orf51A8MQB3 221 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 PPP6CO00743 305 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 ERN1O75460 977 aaKnown RBP11.5□□□□□ -0.57
SKA1-205ENST00000494518 CBX7O95931 251 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 DRD2P14416 443 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 PCSK2P16519 638 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 STARP49675 285 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 SF3B4Q15427 424 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■□□ 16.5
SKA1-205ENST00000494518 TRMT12Q53H54 448 aaKnown RBP11.5□□□□□ -0.57
SKA1-205ENST00000494518 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 PAGE2Q7Z2X7 111 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 CCDC91Q7Z6B0 441 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 METTL4Q8N3J2 472 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 MBD6Q96DN6 1003 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 LCORQ96JN0 433 aaPredicted RBP11.5□□□□□ -0.57
SKA1-205ENST00000494518 ELOVL6Q9H5J4 265 aa11.5□□□□□ -0.57
SKA1-205ENST00000494518 PLEKHF2Q9H8W4 249 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms