RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DHRS4-AS1Q9P1J3 65 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 ARMCX1Q9P291 453 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 RCOR3Q9P2K3 495 aaPredicted RBP3.05□□□□□ -1.92
CD46-216ENST00000490278 SPASTQ9UBP0 616 aa3.05□□□□□ -1.92
CD46-216ENST00000490278 IGHV3OR16-12A0A075B7B8 117 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SSX5O60225 188 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SRPX2O60687 465 aaPredicted RBP3.04□□□□□ -1.92
CD46-216ENST00000490278 PDE5AO76074 875 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 MT-ATP6P00846 226 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 PIGRP01833 764 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 ETS1P14921 441 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 PRDX6P30041 224 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 AKT2P31751 481 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SGSHP51688 502 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 ARHGDIAP52565 204 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 HMGCS2P54868 508 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 ZKSCAN8Q15776 578 aaPredicted RBP3.04□□□□□ -1.92
CD46-216ENST00000490278 SLC25A30Q5SVS4 291 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SPINK14Q6IE38 97 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 GOLGA7Q7Z5G4 137 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 GPBP1Q86WP2 473 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 ELMOD2Q8IZ81 293 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SLC22A18ASQ8N1D0 253 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 ZNF619Q8N2I2 560 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 KDM8Q8N371 416 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 MRPL43Q8N983 215 aaKnown RBP3.04□□□□□ -1.92
CD46-216ENST00000490278 ZNF397Q8NF99 534 aaPredicted RBP3.04□□□□□ -1.92
CD46-216ENST00000490278 CRYGNQ8WXF5 182 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 LHX4Q969G2 390 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 CCDC51Q96ER9 411 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 TSPAN18Q96SJ8 248 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 APOL2Q9BQE5 337 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 APOOQ9BUR5 198 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 TRIM9Q9C026 710 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 CENPMQ9NSP4 180 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 CUTCQ9NTM9 273 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
CD46-216ENST00000490278 RAI14Q9P0K7 980 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 CLIP2Q9UDT6 1046 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 BCAP29Q9UHQ4 241 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 PLA2G4CQ9UP65 541 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 NUDCQ9Y266 331 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 SMAD5-AS1Q9Y6J3 95 aa3.04□□□□□ -1.92
CD46-216ENST00000490278 UBE4BO95155 1302 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 TRAV9-2A0A087WT02 112 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 A0A0J9YVX5 310 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 KRT87PA6NCN2 255 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 TRABD2BA6NFA1 517 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 RANBP6O60518 1105 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 ZNF253O75346 499 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 STK17BO94768 372 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 RALAP11233 206 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 CYP11B1P15538 503 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 GAP43P17677 238 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 IL10P22301 178 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 HSPA1LP34931 641 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ATXN3P54252 364 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 RAG2P55895 527 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 HAND2P61296 217 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 NOP14P78316 857 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 NAAAQ02083 359 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 BNIP1Q12981 228 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 SNX1Q13596 522 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 SMC1AQ14683 1233 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 LTB4RQ15722 352 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ZNF239Q16600 458 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 ZSWIM7Q19AV6 140 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ZNF699Q32M78 642 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ACSF3Q4G176 576 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 SEL1L2Q5TEA6 688 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 RNLSQ5VYX0 342 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 CNSTQ6PJW8 725 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ADAMTSL5Q6ZMM2 481 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ZNF600Q6ZNG1 722 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 TMEM26Q6ZUK4 368 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 SERINC5Q86VE9 423 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 HPS6Q86YV9 775 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 HDDC3Q8N4P3 179 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 OR52J3Q8NH60 311 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 RHOXF1Q8NHV9 184 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 DQX1Q8TE96 717 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 DLX4Q92988 240 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 ZBED6CLQ96FA7 236 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 MCCC1Q96RQ3 725 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 TSPY26PQ9H489 355 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 TMEM231Q9H6L2 316 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ALG9Q9H6U8 611 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 ESM1Q9NQ30 184 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 NINJ2Q9NZG7 142 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 PURGQ9UJV8 347 aaKnown RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 ZNF490Q9ULM2 529 aaPredicted RBP3.03□□□□□ -1.92
CD46-216ENST00000490278 PLEKHA6Q9Y2H5 1048 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
CD46-216ENST00000490278 LRIT2A6NDA9 550 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 MFSD2BA6NFX1 497 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PDLIM1O00151 329 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 TYROBPO43914 113 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 IGHV3-9P01782 118 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 ZCCHC18P0CG32 403 aa3.02□□□□□ -1.93
CD46-216ENST00000490278 PTPN4P29074 926 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms