RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 GPR83Q9NYM4 423 aa3.6□□□□□ -1.83
XRN1-213ENST00000489241 IKZF3Q9UKT9 509 aa3.6□□□□□ -1.83
XRN1-213ENST00000489241 RABL2BQ9UNT1 228 aa3.6□□□□□ -1.83
XRN1-213ENST00000489241 NIP7Q9Y221 180 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRN1-213ENST00000489241 SF3B1O75533 1304 aaKnown RBP eCLIP3.6□□□□□ -1.83
XRN1-213ENST00000489241 AFF2P51816 1311 aa3.6□□□□□ -1.83
XRN1-213ENST00000489241 A0A0A6YYD4 124 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 TRBV5-4A0A0C4DH59 114 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 FBP2O00757 339 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 CFLARO15519 480 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 TBX19O60806 448 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 DUSP11O75319 330 aaKnown RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 OAS1P00973 400 aaKnown RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 CHRNA1P02708 482 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 IQCF3P0C7M6 154 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 RFC2P35250 354 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 CYLC1P35663 651 aaPredicted RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 HTR5AP47898 357 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 ACADVLP49748 655 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 METAP1P53582 386 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 RAG2P55895 527 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 CNTN2Q02246 1040 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 SRYQ05066 204 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 ZNF177Q13360 481 aaPredicted RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 GPM6BQ13491 265 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 KIAA0141Q14154 515 aaPredicted RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 PDK4Q16654 411 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 CDKN3Q16667 212 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 CEP55Q53EZ4 464 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 WLSQ5T9L3 541 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 WDR25Q64LD2 544 aaPredicted RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 WASH2PQ6VEQ5 465 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 P4HA3Q7Z4N8 544 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 KCNMB4Q86W47 210 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 FAM131BQ86XD5 332 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 EFCAB13Q8IY85 973 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 NUP37Q8NFH4 326 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 PCNPQ8WW12 178 aaKnown RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 ANKRD27Q96NW4 1050 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 CASD1Q96PB1 797 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 TNFRSF13CQ96RJ3 184 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 Q9HAA7 133 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 WDR41Q9HAD4 459 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 ZDHHC18Q9NUE0 388 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 MBD2Q9UBB5 411 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 RRP15Q9Y3B9 282 aaKnown RBP3.59□□□□□ -1.83
XRN1-213ENST00000489241 FKBP7Q9Y680 259 aa3.59□□□□□ -1.83
XRN1-213ENST00000489241 SYNJ2O15056 1496 aa3.59□□□□□ -1.84
XRN1-213ENST00000489241 KIF26BQ2KJY2 2108 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 TTC26A0AVF1 554 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ALOX15BO15296 676 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 MAGEB3O15480 346 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZNF749O43361 778 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZNF821O75541 412 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 TOXO94900 526 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ECDO95905 644 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 GSTA1P08263 222 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 SLC35G4P0C7Q5 338 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 CD1DP15813 335 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ATP6V1C1P21283 382 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 GLRA2P23416 452 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 PGFP49763 221 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 NAPAP54920 295 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ERVK11-1P61568 191 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 NUCB2P80303 420 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 SPIBQ01892 262 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZP4Q12836 540 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 UPP1Q16831 310 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ECSCRQ19T08 205 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 UNC50Q53HI1 259 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 CFAP157Q5JU67 520 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 DMKNQ6E0U4 476 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 LEG1Q6P5S2 330 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 LCLAT1Q6UWP7 414 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZNF562Q6V9R5 426 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 CENPSQ8N2Z9 138 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZNRF1Q8ND25 227 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 OR4F17Q8NGA8 305 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 OR52B6Q8NGF0 335 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 OSTF1Q92882 214 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 DLX4Q92988 240 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 ATXN7L3BQ96GX2 97 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 HPDLQ96IR7 371 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 ART5Q96L15 291 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 NAP1L5Q96NT1 182 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 RCHY1Q96PM5 261 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 OR4F4Q96R69 305 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 TSPAN18Q96SJ8 248 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 SYT15Q9BQS2 421 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 TBCDQ9BTW9 1192 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 APOOQ9BUR5 198 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 NT5DC2Q9H857 520 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 FAM114A2Q9NRY5 505 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms