RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 OAS1P00973 400 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 SLC35E2P0CK97 266 aa2.54□□□□□ -2
RFC4-213ENST00000489028 PGAM2P15259 253 aa2.54□□□□□ -2
RFC4-213ENST00000489028 ZNF18P17022 549 aa2.54□□□□□ -2
RFC4-213ENST00000489028 AHCYP23526 432 aa2.54□□□□□ -2
RFC4-213ENST00000489028 CALML3P27482 149 aa2.54□□□□□ -2
RFC4-213ENST00000489028 MAGEA9P43362 315 aa2.54□□□□□ -2
RFC4-213ENST00000489028 ARHGDIAP52565 204 aa2.54□□□□□ -2
RFC4-213ENST00000489028 GALK2Q01415 458 aa2.54□□□□□ -2
RFC4-213ENST00000489028 PPP1R8Q12972 351 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 RFTN1Q14699 578 aaPredicted RBP2.54□□□□□ -2
RFC4-213ENST00000489028 PDK1Q15118 436 aa2.54□□□□□ -2
RFC4-213ENST00000489028 NEK5Q6P3R8 708 aa2.54□□□□□ -2
RFC4-213ENST00000489028 B3GLCTQ6Y288 498 aa2.54□□□□□ -2
RFC4-213ENST00000489028 SERPINA12Q8IW75 414 aa2.54□□□□□ -2
RFC4-213ENST00000489028 FBXO16Q8IX29 292 aaPredicted RBP2.54□□□□□ -2
RFC4-213ENST00000489028 UBQLNLQ8IYU4 475 aa2.54□□□□□ -2
RFC4-213ENST00000489028 ARL14Q8N4G2 192 aa2.54□□□□□ -2
RFC4-213ENST00000489028 EXOC6Q8TAG9 804 aa2.54□□□□□ -2
RFC4-213ENST00000489028 FBXO25Q8TCJ0 367 aa2.54□□□□□ -2
RFC4-213ENST00000489028 RNASE8Q8TDE3 154 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 BIRC7Q96CA5 298 aa2.54□□□□□ -2
RFC4-213ENST00000489028 VSIG2Q96IQ7 327 aa2.54□□□□□ -2
RFC4-213ENST00000489028 ZNF560Q96MR9 790 aa2.54□□□□□ -2
RFC4-213ENST00000489028 LINC00167Q96N53 147 aa2.54□□□□□ -2
RFC4-213ENST00000489028 FAM111AQ96PZ2 611 aa2.54□□□□□ -2
RFC4-213ENST00000489028 DDX50Q9BQ39 737 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 JPH2Q9BR39 696 aaPredicted RBP2.54□□□□□ -2
RFC4-213ENST00000489028 DDX47Q9H0S4 455 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 TMEM245Q9H330 911 aa2.54□□□□□ -2
RFC4-213ENST00000489028 SYTL2Q9HCH5 934 aa2.54□□□□□ -2
RFC4-213ENST00000489028 PLSCR3Q9NRY6 295 aa2.54□□□□□ -2
RFC4-213ENST00000489028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.54□□□□□ -2
RFC4-213ENST00000489028 PRODH2Q9UF12 536 aa2.54□□□□□ -2
RFC4-213ENST00000489028 MRTO4Q9UKD2 239 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 DIMT1Q9UNQ2 313 aaKnown RBP2.54□□□□□ -2
RFC4-213ENST00000489028 TEX264Q9Y6I9 313 aa2.54□□□□□ -2
RFC4-213ENST00000489028 CFAP65Q6ZU64 1925 aaKnown RBP2.53□□□□□ -2
RFC4-213ENST00000489028 FRG2CA6NGY1 282 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ARHGAP42A6NI28 874 aa2.53□□□□□ -2
RFC4-213ENST00000489028 PSMD3O43242 534 aa2.53□□□□□ -2
RFC4-213ENST00000489028 SSX5O60225 188 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ATP6V1G1O75348 118 aa2.53□□□□□ -2
RFC4-213ENST00000489028 REC8O95072 547 aa2.53□□□□□ -2
RFC4-213ENST00000489028 SLC4A1P02730 911 aa2.53□□□□□ -2
RFC4-213ENST00000489028 P0C879 139 aa2.53□□□□□ -2
RFC4-213ENST00000489028 LAMP1P11279 417 aa2.53□□□□□ -2
RFC4-213ENST00000489028 AREGP15514 252 aa2.53□□□□□ -2
RFC4-213ENST00000489028 UCP1P25874 307 aa2.53□□□□□ -2
RFC4-213ENST00000489028 CD86P42081 329 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ASMTP46597 345 aa2.53□□□□□ -2
RFC4-213ENST00000489028 FNTAP49354 379 aa2.53□□□□□ -2
RFC4-213ENST00000489028 SMSP52788 366 aa2.53□□□□□ -2
RFC4-213ENST00000489028 NDST1P52848 882 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ATXN3P54252 364 aaPredicted RBP2.53□□□□□ -2
RFC4-213ENST00000489028 KCNK10P57789 538 aa2.53□□□□□ -2
RFC4-213ENST00000489028 PDE7AQ13946 482 aa2.53□□□□□ -2
RFC4-213ENST00000489028 GAMTQ14353 236 aa2.53□□□□□ -2
RFC4-213ENST00000489028 GK2Q14410 553 aaPredicted RBP2.53□□□□□ -2
RFC4-213ENST00000489028 SLC10A1Q14973 349 aa2.53□□□□□ -2
RFC4-213ENST00000489028 STX1AQ16623 288 aa2.53□□□□□ -2
RFC4-213ENST00000489028 CCDC40Q4G0X9 1142 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ZNF544Q6NX49 715 aa2.53□□□□□ -2
RFC4-213ENST00000489028 STEAP1BQ6NZ63 245 aa2.53□□□□□ -2
RFC4-213ENST00000489028 CD164L2Q6UWJ8 174 aa2.53□□□□□ -2
RFC4-213ENST00000489028 MFSD7Q6UXD7 560 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ADAMTSL5Q6ZMM2 481 aa2.53□□□□□ -2
RFC4-213ENST00000489028 RBM43Q6ZSC3 357 aaKnown RBP2.53□□□□□ -2
RFC4-213ENST00000489028 FAM43BQ6ZT52 329 aaPredicted RBP2.53□□□□□ -2
RFC4-213ENST00000489028 MOB2Q70IA6 237 aa2.53□□□□□ -2
RFC4-213ENST00000489028 PRR22Q8IZ63 422 aa2.53□□□□□ -2
RFC4-213ENST00000489028 KDM8Q8N371 416 aa2.53□□□□□ -2
RFC4-213ENST00000489028 LEMD2Q8NC56 503 aa2.53□□□□□ -2
RFC4-213ENST00000489028 CNNM3Q8NE01 707 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ZNF564Q8TBZ8 553 aaPredicted RBP2.53□□□□□ -2
RFC4-213ENST00000489028 GLYATL1Q969I3 302 aa2.53□□□□□ -2
RFC4-213ENST00000489028 COG3Q96JB2 828 aa2.53□□□□□ -2
RFC4-213ENST00000489028 KCNK16Q96T55 309 aa2.53□□□□□ -2
RFC4-213ENST00000489028 MAPKAP1Q9BPZ7 522 aa2.53□□□□□ -2
RFC4-213ENST00000489028 HSD3B7Q9H2F3 369 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ZCCHC3Q9NUD5 404 aaKnown RBP2.53□□□□□ -2
RFC4-213ENST00000489028 NINJ2Q9NZG7 142 aa2.53□□□□□ -2
RFC4-213ENST00000489028 ACTR3BQ9P1U1 418 aa2.53□□□□□ -2
RFC4-213ENST00000489028 KCNN3Q9UGI6 736 aa2.53□□□□□ -2
RFC4-213ENST00000489028 PRO0461Q9UI25 63 aa2.53□□□□□ -2
RFC4-213ENST00000489028 PLEKHA6Q9Y2H5 1048 aa2.53□□□□□ -2
RFC4-213ENST00000489028 DHX29Q7Z478 1369 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 KIF7Q2M1P5 1343 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 TRABD2BA6NFA1 517 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 CFAP73A6NFT4 308 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 EFCAB7A8K855 629 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 TNFSF11O14788 317 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 RASGRF2O14827 1237 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 HDAC3O15379 428 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 GJB5O95377 273 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 GOT2P00505 430 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 FCER2P06734 321 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 MMP10P09238 476 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 UGT1A6P19224 532 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 CCNA2P20248 432 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms