RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 HRNRQ86YZ3 2850 aaPredicted RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 SEMA3DO95025 777 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 GSTA1P08263 222 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 SBK3P0C264 359 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 GPX3P22352 226 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 ABCD3P28288 659 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 SOX18P35713 384 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 PEX19P40855 299 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 FOXD4Q12950 439 aaPredicted RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 IFT88Q13099 833 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 GGTA1PQ4G0N0 100 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 MILR1Q7Z6M3 343 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 PM20D2Q8IYS1 436 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 TMEM151AQ8N4L1 468 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 SIMC1Q8NDZ2 872 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 CHDHQ8NE62 594 aaPredicted RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 GOT1L1Q8NHS2 421 aaPredicted RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 SECISBP2Q96T21 854 aaKnown RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 C1QTNF3Q9BXJ4 246 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 MRPL1Q9BYD6 325 aaKnown RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 NXF5Q9H1B4 397 aaKnown RBP18.56■□□□□ 0.56
CHRD-215ENST00000485883 TMEM216Q9P0N5 145 aa18.56■□□□□ 0.56
CHRD-215ENST00000485883 C2orf72A6NCS6 295 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 GOLGA8RI6L899 631 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 ABCB1P08183 1280 aaPredicted RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 CPMP14384 443 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 HOXB4P17483 251 aaPredicted RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 ATP5F1P24539 256 aaPredicted RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 DNASE1P24855 282 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 PTPN6P29350 595 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 NAGLUP54802 743 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 NRG3P56975 720 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 NHSL2Q5HYW2 709 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 TIGD3Q6B0B8 471 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 FAM111BQ6SJ93 734 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 RPS27LQ71UM5 84 aaKnown RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 YRDCQ86U90 279 aaKnown RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 OR4F6Q8NGB9 312 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 LINC01560Q8TB33 94 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 ABTB1Q969K4 478 aaPredicted RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 HSPBAP1Q96EW2 488 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 TMEM41AQ96HV5 264 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 GSX1Q9H4S2 264 aaPredicted RBP18.55■□□□□ 0.56
CHRD-215ENST00000485883 ELOVL6Q9H5J4 265 aa18.55■□□□□ 0.56
CHRD-215ENST00000485883 A0A1B0GTL3 188 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 CD8B2A6NJW9 211 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 PYGBP11216 843 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 PTGDSP41222 190 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 SLCO1A2P46721 670 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 TMED10P49755 219 aaKnown RBP18.54■□□□□ 0.56
CHRD-215ENST00000485883 CDH13P55290 713 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 PPP2R2AP63151 447 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 DUSP2Q05923 314 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 MGAT2Q10469 447 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 EXOSC7Q15024 291 aaKnown RBP18.54■□□□□ 0.56
CHRD-215ENST00000485883 DAZAP2Q15038 168 aaPredicted RBP18.54■□□□□ 0.56
CHRD-215ENST00000485883 SGO1Q5FBB7 561 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 CCNYL2Q5T2Q4 361 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 C9orf106Q8NAJ2 232 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 FAM83FQ8NEG4 500 aaPredicted RBP18.54■□□□□ 0.56
CHRD-215ENST00000485883 OR7G1Q8NGA0 311 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 MZB1Q8WU39 189 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 LRRC46Q96FV0 321 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 NODALQ96S42 347 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 GALNT9Q9HCQ5 603 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 FARSBQ9NSD9 589 aaKnown RBP18.54■□□□□ 0.56
CHRD-215ENST00000485883 CES1P1Q9UKY3 287 aa18.54■□□□□ 0.56
CHRD-215ENST00000485883 MBD3L4A6NDZ8 208 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 MBD3L3A6NE82 208 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 TUBAL3A6NHL2 446 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 MBD3L5A6NJ08 208 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 EEF1E1-BLOC1S5C9J1V9 151 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 EEF1E1O43324 174 aaKnown RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 SUPT7LO94864 414 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 SHBGP04278 402 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 PORP16435 677 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 FEN1P39748 380 aaKnown RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 DGKQP52824 942 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 PRICKLE4Q2TBC4 344 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 FAM180BQ6P0A1 224 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 PLXDC2Q6UX71 529 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 ANGPTL8Q6UXH0 198 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 SLC22A9Q8IVM8 553 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 VWA5B2Q8N398 1253 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 METTL4Q8N3J2 472 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 C17orf47Q8NEP4 570 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 OR1J4Q8NGS1 313 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 MBD3L2Q8NHZ7 208 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 TRPC4APQ8TEL6 797 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 HGDQ93099 445 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 ITPAQ9BY32 194 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 BRINP2Q9C0B6 783 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 METTL7AQ9H8H3 244 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 DLL4Q9NR61 685 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 AHSPQ9NZD4 102 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 EHD3Q9NZN3 535 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 TRPS1Q9UHF7 1281 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 DCDC2Q9UHG0 476 aa18.53■□□□□ 0.56
CHRD-215ENST00000485883 FOXD3Q9UJU5 478 aaPredicted RBP18.53■□□□□ 0.56
CHRD-215ENST00000485883 SNX6Q9UNH7 406 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms