RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SLC10A1Q14973 349 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 RPS6KA2Q15349 733 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 PDCD2Q16342 344 aaPredicted RBP11.52□□□□□ -0.57
PTCD1-205ENST00000485746 C3AR1Q16581 482 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 UGT3A2Q3SY77 523 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 TBCELQ5QJ74 424 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 ANKRD26P1Q6NSI1 321 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 TMEM107Q6UX40 140 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 R3HCC1LQ7Z5L2 792 aaKnown RBP11.52□□□□□ -0.57
PTCD1-205ENST00000485746 KIRREL3Q8IZU9 778 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 FBXW8Q8N3Y1 598 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 LIX1Q8N485 282 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF441Q8N8Z8 693 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 C17orf47Q8NEP4 570 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 OR52N2Q8NGI0 321 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 ZFP28Q8NHY6 868 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 RELTQ969Z4 430 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 CTHRC1Q96CG8 243 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 OMA1Q96E52 524 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 PPP1R36Q96LQ0 422 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 DOHHQ9BU89 302 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 GLIPR2Q9H4G4 154 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 METTL7AQ9H8H3 244 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 ANKRA2Q9H9E1 313 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 DDX18Q9NVP1 670 aaKnown RBP11.52□□□□□ -0.57
PTCD1-205ENST00000485746 TAS2R7Q9NYW3 318 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 B4GALT7Q9UBV7 327 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.57
PTCD1-205ENST00000485746 DTX4Q9Y2E6 619 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 OR10H1Q9Y4A9 318 aa11.52□□□□□ -0.57
PTCD1-205ENST00000485746 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 FRG2CA6NGY1 282 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ACOX3O15254 700 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ZNHIT1O43257 154 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ERN1O75460 977 aaKnown RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 PPM1BO75688 479 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SNUPNO95149 360 aaKnown RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 LDLRP01130 860 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 TPOP07202 933 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 BCKDHAP12694 445 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SDC1P18827 310 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 DRD5P21918 477 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 IL12BP29460 328 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 CA7P43166 264 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 MAGEA5P43359 124 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 EMDP50402 254 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 RPL14P50914 215 aaKnown RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 MANFP55145 182 aaKnown RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 MAD2L1Q13257 205 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 MPP2Q14168 576 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 CASP8Q14790 479 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 TOMM20Q15388 145 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ZNHIT3Q15649 155 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 TNFAIP8L3Q5GJ75 292 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 IL23RQ5VWK5 629 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 MTFR2Q6P444 385 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 NUP54Q7Z3B4 507 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SZRD1Q7Z422 152 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 PACS2Q86VP3 889 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SLC44A2Q8IWA5 706 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 EID3Q8N140 333 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF781Q8N8C0 355 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SIMC1Q8NDZ2 872 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 OR7G2Q8NG99 324 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SPPL2AQ8TCT8 520 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF597Q96LX8 424 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 C1orf50Q9BV19 199 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF395Q9H8N7 513 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 FOLH1BQ9HBA9 442 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 TMBIM4Q9HC24 238 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 ARGLU1Q9NWB6 273 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 GIMAP2Q9UG22 337 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.51□□□□□ -0.57
PTCD1-205ENST00000485746 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
PTCD1-205ENST00000485746 SHANK1Q9Y566 2161 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 PLOD3O60568 738 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ZG16O60844 167 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 NME6O75414 186 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 TRAPPC6AO75865 159 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 SLITRK5O94991 958 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ABCB1P08183 1280 aaPredicted RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 DHRS4L1P0CG22 281 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 PRPS2P11908 318 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 NAGAP17050 411 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ARRB2P32121 409 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 RPL3P39023 403 aaKnown RBP11.5□□□□□ -0.57
PTCD1-205ENST00000485746 MC3RP41968 323 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 PRKAG1P54619 331 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 HSPB3Q12988 150 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 DUSP8Q13202 625 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CEBPEQ15744 281 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 PRSS53Q2L4Q9 553 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 CMPK2Q5EBM0 449 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ARHGAP11AQ6P4F7 1023 aa11.5□□□□□ -0.57
PTCD1-205ENST00000485746 ZNF551Q7Z340 670 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms