RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 BRF2Q9HAW0 419 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 EHD3Q9NZN3 535 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF780BQ9Y6R6 833 aa13.94□□□□□ -0.18
LIMS3-203ENST00000480744 ANKHD1Q8IWZ3 2542 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 C2orf72A6NCS6 295 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 MANBAO00462 879 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 SUPT7LO94864 414 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 EPPINO95925 133 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 IL2RAP01589 272 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 ATP1B1P05026 303 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 BMP7P18075 431 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 TAC1P20366 129 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 DNAJA1P31689 397 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 ASCL1P50553 236 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 MRPS35P82673 323 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 CLCQ05315 142 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 MGAT2Q10469 447 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 MAP4K2Q12851 820 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 TRMT12Q53H54 448 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 LGSNQ5TDP6 509 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 TIGD3Q6B0B8 471 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 YRDCQ86U90 279 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 PM20D2Q8IYS1 436 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 OR52R1Q8NGF1 315 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 OR1J4Q8NGS1 313 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 HSPBAP1Q96EW2 488 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 LCORQ96JN0 433 aaPredicted RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 TRIB1Q96RU8 372 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 NODALQ96S42 347 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 OSBPL11Q9BXB4 747 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 UGT2B28Q9BY64 529 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 POLDIP3Q9BY77 421 aaKnown RBP13.93□□□□□ -0.18
LIMS3-203ENST00000480744 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 VPS29Q9UBQ0 182 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 UTS2RQ9UKP6 389 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 PLLPQ9Y342 182 aa13.93□□□□□ -0.18
LIMS3-203ENST00000480744 CDH16O75309 829 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 CBX7O95931 251 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 KRT6AP02538 564 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 KRT6BP04259 564 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 CD1EP15812 388 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 PCSK2P16519 638 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 NAGAP17050 411 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 PTPN6P29350 595 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 HMOX2P30519 316 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 CEACAM8P31997 349 aaPredicted RBP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 GCKP35557 465 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 HSD17B3P37058 310 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 KRT6CP48668 564 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 RASA2Q15283 850 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 SF3B4Q15427 424 aaKnown RBP eCLIP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 UNC50Q53HI1 259 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 DCST1Q5T197 706 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 GPRIN3Q6ZVF9 776 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 NUP54Q7Z3B4 507 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 TMEM151AQ8N4L1 468 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 FAM83FQ8NEG4 500 aaPredicted RBP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 HGDQ93099 445 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 ABTB1Q969K4 478 aaPredicted RBP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 CNRIP1Q96F85 164 aaPredicted RBP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 GPATCH1Q9BRR8 931 aaKnown RBP13.92□□□□□ -0.18
LIMS3-203ENST00000480744 C1QTNF3Q9BXJ4 246 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 PRDM14Q9GZV8 571 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 GALNT9Q9HCQ5 603 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 SERHLQ9NQF3 203 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 CRIM1Q9NZV1 1036 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 TMEM216Q9P0N5 145 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 PRODH2Q9UF12 536 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 MAPRE3Q9UPY8 281 aa13.92□□□□□ -0.18
LIMS3-203ENST00000480744 GNG14A0A1W2PPG7 69 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 PRAMEF25A6NGN4 478 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 SYT5O00445 386 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 SNPHO15079 494 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 ACOX3O15254 700 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 ICOSLGO75144 302 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 UGT2B11O75310 529 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 CTAG2O75638 210 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 IL3P08700 152 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 CHN1P15882 459 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 TIMP3P35625 211 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 AGFG1P52594 562 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 TRA2BP62995 288 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 NSUN5P2Q63ZY6 315 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 SLC30A6Q6NXT4 461 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 GSPT2Q8IYD1 628 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 RDH11Q8TC12 318 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 METTL6Q8TCB7 284 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 RNASE6Q93091 150 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 EXOSC8Q96B26 276 aaKnown RBP13.91□□□□□ -0.18
LIMS3-203ENST00000480744 WDYHV1Q96HA8 205 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 TMEM237Q96Q45 408 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 SH3GL2Q99962 352 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 EPB41L4BQ9H329 900 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 ANKRA2Q9H9E1 313 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF639Q9UID6 485 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms