RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 TRIM13O60858 407 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PPM1BO75688 479 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 LRATO95237 230 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 ABCB1P08183 1280 aaPredicted RBP13.78□□□□□ -0.2
TDP2-205ENST00000480495 HOXD4P09016 255 aaPredicted RBP13.78□□□□□ -0.2
TDP2-205ENST00000480495 RFPL3SP0C7P2 107 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 COX6B1P14854 86 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 DDCP20711 480 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 DRD5P21918 477 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 ACVR2AP27037 513 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 MPIP34949 423 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PTGER4P35408 488 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 EMDP50402 254 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PSPHP78330 225 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 C2orf80Q0P641 193 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 ERCC6LQ2NKX8 1250 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 NUP54Q7Z3B4 507 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 TRABD2AQ86V40 505 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PRR22Q8IZ63 422 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 MARVELD2Q8N4S9 558 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 BANPQ8N9N5 519 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 OR2W6PQ8NHA6 318 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 RND1Q92730 232 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 RILPQ96NA2 401 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 BBS4Q96RK4 519 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
TDP2-205ENST00000480495 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 PNPLA3Q9NST1 481 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 ACAD8Q9UKU7 415 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
TDP2-205ENST00000480495 FRG2CA6NGY1 282 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 NPIPB8E9PQR5 432 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 SLC28A1O00337 649 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 TO15178 435 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 WDR1O75083 606 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 SLITRK5O94991 958 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 SLU7O95391 586 aaKnown RBP13.77□□□□□ -0.21
TDP2-205ENST00000480495 GDF1P27539 372 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 CHRNB4P30926 498 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 CASP3P42574 277 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.21
TDP2-205ENST00000480495 PLCXD2Q0VAA5 305 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 PCLAFQ15004 111 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 CDSNQ15517 529 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 NNATQ16517 81 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 FAM71E1Q6IPT2 247 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 NOXRED1Q6NXP6 359 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 ZNF585AQ6P3V2 769 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 RNF165Q6ZSG1 346 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 IKBIPQ70UQ0 350 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 FAM9CQ8IZT9 166 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 LIX1Q8N485 282 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 SIMC1Q8NDZ2 872 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 OR5M9Q8NGP3 310 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 OR9A2Q8NGT5 310 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.77□□□□□ -0.21
TDP2-205ENST00000480495 AENQ8WTP8 325 aaKnown RBP13.77□□□□□ -0.21
TDP2-205ENST00000480495 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 NTNG2Q96CW9 530 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 OMA1Q96E52 524 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 TMEM41AQ96HV5 264 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
TDP2-205ENST00000480495 TNFRSF12AQ9NP84 129 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 MIEF1Q9NQG6 463 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 GPR55Q9Y2T6 319 aaPredicted RBP13.77□□□□□ -0.21
TDP2-205ENST00000480495 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
TDP2-205ENST00000480495 PCNX1Q96RV3 2341 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 MYO1GB0I1T2 1018 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 AZIN1O14977 448 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 RGS14O43566 566 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 ZNF500O60304 480 aaPredicted RBP13.76□□□□□ -0.21
TDP2-205ENST00000480495 PLOD3O60568 738 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 CHEK2O96017 543 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 NEFHP12036 1026 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 GABRA1P14867 456 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 PRPH2P23942 346 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 MASP1P48740 699 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 PMPCAQ10713 525 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 SNTA1Q13424 505 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 BICRALQ6AI39 1079 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 SLC30A6Q6NXT4 461 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 B3GNT6Q6ZMB0 384 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 SRRM1Q8IYB3 904 aaKnown RBP13.76□□□□□ -0.21
TDP2-205ENST00000480495 LILRB4Q8NHJ6 448 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 KAT2AQ92830 837 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 HGDQ93099 445 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 BTBD9Q96Q07 612 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 METTL7AQ9H8H3 244 aa13.76□□□□□ -0.21
TDP2-205ENST00000480495 SENP1Q9P0U3 644 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms