RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RIMKLAQ8IXN7 391 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 FAM9CQ8IZT9 166 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 APCDD1LQ8NCL9 501 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MORN4Q8NDC4 146 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 OR9I1Q8NGQ6 314 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 SUN3Q8TAQ9 357 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ELP5Q8TE02 316 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ZNF721Q8TF20 911 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 RELTQ969Z4 430 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MTERF3Q96E29 417 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 VMP1Q96GC9 406 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 AMDHD1Q96NU7 426 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 PRPF18Q99633 342 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 ELAC2Q9BQ52 826 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 DUSP26Q9BV47 211 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 DEFB126Q9BYW3 111 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 CXorf21Q9HAI6 301 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 PLA2G3Q9NZ20 509 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MAT2BQ9NZL9 334 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 COPS7AQ9UBW8 275 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 BCAP29Q9UHQ4 241 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ZNF223Q9UK11 482 aaPredicted RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 ZFHX3Q15911 3703 aa8.4□□□□□ -1.07
VCP-206ENST00000480327 A0A1W2PRB8 838 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 GMNCA6NCL1 334 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SYNDIG1LA6NDD5 238 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 TBX19O60806 448 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SLC22A3O75751 556 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 C6orf47O95873 294 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ABCB1P08183 1280 aaPredicted RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 DRD4P21917 467 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ELAVL4P26378 380 aaKnown RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 MST1P26927 711 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 GALNSP34059 522 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 GPC1P35052 558 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SOX18P35713 384 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 MC3RP41968 323 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 GPR143P51810 404 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 STX1BP61266 288 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 MGAT2Q10469 447 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 TLR1Q15399 786 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 CEBPEQ15744 281 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 GSTA3Q16772 222 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SPRED3Q2MJR0 410 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 FAM174BQ3ZCQ3 159 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 PDCD4Q53EL6 469 aaKnown RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 ZNF628Q5EBL2 1059 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SPANXN4Q5MJ08 99 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 TMEM107Q6UX40 140 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 RNF111Q6ZNA4 994 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SZRD1Q7Z422 152 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 CPLX4Q7Z7G2 160 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ANKRD46Q86W74 232 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 MCEMP1Q8IX19 187 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SAMD14Q8IZD0 417 aaPredicted RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 CLECL1Q8IZS7 167 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 MIER2Q8N344 545 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 C7orf57Q8NEG2 295 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 OR7G2Q8NG99 324 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 OR1N1Q8NGS0 311 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ITLN2Q8WWU7 325 aaPredicted RBP8.39□□□□□ -1.07
VCP-206ENST00000480327 COQ8BQ96D53 544 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 FBXL20Q96IG2 436 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ART5Q96L15 291 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 GAL3ST4Q96RP7 486 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 LMF1Q96S06 567 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ZBTB18Q99592 522 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 SIKE1Q9BRV8 207 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 CDCP1Q9H5V8 836 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 MMP25Q9NPA2 562 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 ATAD3AQ9NVI7 634 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 TAS2R7Q9NYW3 318 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 KLHL14Q9P2G3 628 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 CCDC168Q8NDH2 2452 aa8.39□□□□□ -1.07
VCP-206ENST00000480327 PRSS44E7EML9 344 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 WWP2O00308 870 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 CFLARO15519 480 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 ZFAND5O76080 213 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 CPSF4O95639 269 aaKnown RBP8.38□□□□□ -1.07
VCP-206ENST00000480327 CBX7O95931 251 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 CLPSP04118 112 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 IGKV3-11P04433 115 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 CD1EP15812 388 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 DDX5P17844 614 aaKnown RBP8.38□□□□□ -1.07
VCP-206ENST00000480327 S1PR1P21453 382 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 GPX3P22352 226 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 S100A3P33764 101 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 KIR3DL1P43629 444 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 TNFSF10P50591 281 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 POLR2JP52435 117 aaKnown RBP8.38□□□□□ -1.07
VCP-206ENST00000480327 CLNS1AP54105 237 aaKnown RBP8.38□□□□□ -1.07
VCP-206ENST00000480327 PRKAG1P54619 331 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 WNT3P56703 355 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 SLC37A1P57057 533 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 C21orf58P58505 322 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 RNF4P78317 190 aa8.38□□□□□ -1.07
VCP-206ENST00000480327 PHC1P78364 1004 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms