RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 LTB4RQ15722 352 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 FNDC7Q5VTL7 733 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 FAM71E1Q6IPT2 247 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 C3P1Q6ZMU1 363 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 CCDC116Q8IYX3 515 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 ADCY4Q8NFM4 1077 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 OR52R1Q8NGF1 315 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 DIO2Q92813 273 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 MARVELD3Q96A59 401 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 BTBD9Q96Q07 612 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 ITPAQ9BY32 194 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 UBQLN3Q9H347 655 aa21.49■■□□□ 1.03
C9orf3-215ENST00000478473 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-215ENST00000478473 GPR55Q9Y2T6 319 aaPredicted RBP21.49■■□□□ 1.03
C9orf3-215ENST00000478473 EXPH5Q8NEV8 1989 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 CACNA1CQ13936 2221 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 TRGV5A0A0B4J1U4 118 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 ATP6AP2A0A1C7CYW4 349 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 MYO1GB0I1T2 1018 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 NPIPA2E9PIF3 369 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 NPIPA3F8WFD2 350 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 ATP6AP2O75787 350 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 SLITRK5O94991 958 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 FGF4P08620 206 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 ENDOUP21128 410 aaKnown RBP21.48■■□□□ 1.03
C9orf3-215ENST00000478473 PSPHP78330 225 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 FAM180BQ6P0A1 224 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 IKBIPQ70UQ0 350 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 NUP54Q7Z3B4 507 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 MREGQ8N565 214 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 CCDC63Q8NA47 563 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 HGDQ93099 445 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 SARAFQ96BY9 339 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 ZNF764Q96H86 408 aaPredicted RBP21.48■■□□□ 1.03
C9orf3-215ENST00000478473 TMEM41AQ96HV5 264 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 FCRL1Q96LA6 429 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 ZNF597Q96LX8 424 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 BCAP29Q9UHQ4 241 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 EXO1Q9UQ84 846 aaKnown RBP21.48■■□□□ 1.03
C9orf3-215ENST00000478473 NINQ8N4C6 2090 aa21.48■■□□□ 1.03
C9orf3-215ENST00000478473 TLDC2A0PJX2 215 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 FRG2CA6NGY1 282 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 SLU7O95391 586 aaKnown RBP21.47■■□□□ 1.03
C9orf3-215ENST00000478473 HOXD4P09016 255 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-215ENST00000478473 IFI6P09912 130 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 MPIP34949 423 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 PTGER4P35408 488 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 MAN2A2P49641 1150 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 MRPS35P82673 323 aaKnown RBP21.47■■□□□ 1.03
C9orf3-215ENST00000478473 SNTA1Q13424 505 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 SPDYAQ5MJ70 313 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 TMEM198Q66K66 360 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 VSTM2LQ96N03 204 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 RILPQ96NA2 401 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 STMN4Q9H169 189 aaPredicted RBP21.47■■□□□ 1.03
C9orf3-215ENST00000478473 RUBCNLQ9H714 662 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 PNPLA3Q9NST1 481 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 GIMAP4Q9NUV9 329 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 COQ3Q9NZJ6 369 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 B4GALT7Q9UBV7 327 aa21.47■■□□□ 1.03
C9orf3-215ENST00000478473 PHF3Q92576 2039 aaKnown RBP21.46■■□□□ 1.03
C9orf3-215ENST00000478473 A0A087WV62 115 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 FIGNL2A6NMB9 653 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 WDR1O75083 606 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 HPNP05981 417 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 CT45A8P0DMV1 189 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 CT45A9P0DMV2 189 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 ACVR2AP27037 513 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 BTKQ06187 659 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 IMPG1Q17R60 797 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 CT45A2Q5DJT8 189 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 NOXRED1Q6NXP6 359 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 Q6ZSR9 355 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 ACAD11Q709F0 780 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 OR5M3Q8NGP4 307 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 OR9A2Q8NGT5 310 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 NEIL3Q8TAT5 605 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 ASB5Q8WWX0 329 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 EXOSC8Q96B26 276 aaKnown RBP21.46■■□□□ 1.03
C9orf3-215ENST00000478473 TREX2Q9BQ50 279 aaPredicted RBP21.46■■□□□ 1.03
C9orf3-215ENST00000478473 EBPLQ9BY08 206 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 SPRR3Q9UBC9 169 aa21.46■■□□□ 1.03
C9orf3-215ENST00000478473 APCP25054 2843 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 SLC28A1O00337 649 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 PLOD2O00469 737 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 AZIN1O14977 448 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 NPHS1O60500 1241 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 CRCPO75575 148 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 C2orf80Q0P641 193 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 PRSS53Q2L4Q9 553 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 RTL6Q6ICC9 239 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 FAM9CQ8IZT9 166 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 RPRMLQ8N4K4 120 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 LILRB4Q8NHJ6 448 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 RNF138Q8WVD3 245 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 RND1Q92730 232 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 SDCCAG3Q96C92 435 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 OMA1Q96E52 524 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 SLC35A4Q96G79 324 aa21.45■■□□□ 1.02
C9orf3-215ENST00000478473 ENKD1Q9H0I2 346 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms