RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MEIOBQ8N635 442 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ATP6V1C2Q8NEY4 427 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 DNASE1L2Q92874 299 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 MRPL38Q96DV4 380 aaKnown RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 HMCESQ96FZ2 354 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 MEGF10Q96KG7 1140 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 TAPBPLQ9BX59 468 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 VN1R3Q9BXE9 311 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ENKD1Q9H0I2 346 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC25A51Q9H1U9 297 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 RIMS4Q9H426 269 aaPredicted RBP12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 ANKRA2Q9H9E1 313 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 PISDQ9UG56 409 aa12.01□□□□□ -0.49
RTFDC1-207ENST00000477573 A0A1W2PQL4 384 aaPredicted RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF840PA6NDX5 716 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 TEX46H3BTG2 121 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF197O14709 1029 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ADAMDEC1O15204 470 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 HPP00738 406 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 IL1AP01583 271 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 HLA-DQB2P05538 268 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 RNH1P13489 461 aaKnown RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 IL1RNP18510 177 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ANXA7P20073 488 aaKnown RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 TACR2P21452 398 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 OR1E1P30953 314 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PPM1AP35813 382 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 GNALP38405 381 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 GCGRP47871 477 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 OLIG2Q13516 323 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PCID2Q5JVF3 399 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 CERCAMQ5T4B2 595 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 LIPNQ5VXI9 398 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ANKRD34AQ69YU3 496 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 LDLRAD3Q86YD5 345 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 DENND1CQ8IV53 801 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 OR2L5Q8NG80 312 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 SPATA22Q8NHS9 363 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 AP3S1Q92572 193 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PLD4Q96BZ4 506 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF419Q96HQ0 510 aaPredicted RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 LRFN5Q96NI6 719 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 ACTR8Q9H981 624 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 AKAP7Q9P0M2 348 aaPredicted RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 LEF1Q9UJU2 399 aaPredicted RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 CLCA2Q9UQC9 943 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 POLR3HQ9Y535 204 aaPredicted RBP12□□□□□ -0.49
RTFDC1-207ENST00000477573 PCDHGC4Q9Y5F7 938 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PCDHGA6Q9Y5G7 932 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PCDHGA5Q9Y5G8 931 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 PCDHGA1Q9Y5H4 931 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 LTBP2Q14767 1821 aa12□□□□□ -0.49
RTFDC1-207ENST00000477573 NYNRINQ9P2P1 1898 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 MEX3AA1L020 520 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 A6NJY4 79 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 ANXA2P2A6NMY6 339 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 DISC1C4P0D8 188 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 PRRG1O14668 218 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 VPS4BO75351 444 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 ZNF37AP17032 561 aaPredicted RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 CEACAM6P40199 344 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 CTSCP53634 463 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 PPP3R1P63098 170 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 YBX1P67809 324 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 GLO1Q04760 184 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 IL10RBQ08334 325 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 CDH18Q13634 790 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 RAB33AQ14088 237 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 HABP2Q14520 560 aaPredicted RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 PLA1AQ53H76 456 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 FRMPD2BQ6IN97 320 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 GCNT7Q6ZNI0 430 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 PPHLN1Q8NEY8 458 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 OR10H5Q8NGA6 315 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 OR10J5Q8NHC4 309 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 IGSF8Q969P0 613 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 COL26A1Q96A83 441 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 ISG20Q96AZ6 181 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 C7orf34Q96L11 122 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 TSNAXQ99598 290 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 REEP4Q9H6H4 257 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 ACSS2Q9NR19 701 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 TMEM45AQ9NWC5 275 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 NUBP2Q9Y5Y2 271 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 TMEM210A6NLX4 147 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 E9PQ18 207 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 MED6O75586 246 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 PRKACGP22612 351 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 ITGA3P26006 1051 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 G0S2P27469 103 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 SDC2P34741 201 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 KIR3DL2P43630 455 aa11.99□□□□□ -0.49
RTFDC1-207ENST00000477573 RAG2P55895 527 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms