RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RAP1GDS1P52306 607 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 SNTA1Q13424 505 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 FRG1Q14331 258 aaKnown RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 MRM1Q6IN84 353 aaKnown RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 IFNEQ86WN2 208 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 GALNT12Q8IXK2 581 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 PDPRQ8NCN5 879 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 HUS1BQ8NHY5 278 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 MS4A14Q96JA4 679 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 SLC39A3Q9BRY0 314 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 OSBPL11Q9BXB4 747 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 NXF5Q9H1B4 397 aaKnown RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 POPDC3Q9HBV1 291 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 TAS2R10Q9NYW0 307 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 HEY2Q9UBP5 337 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 CHMP2BQ9UQN3 213 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 DTX4Q9Y2E6 619 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 DNALI1O14645 258 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 KLF4O43474 513 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 TLX2O43763 284 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 AIFM1O95831 613 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CGAP01215 116 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 THBDP07204 575 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 S1PR1P21453 382 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CNTFP26441 200 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 GMPRP36959 345 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 ARFIP1P53367 373 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 DDX39BQ13838 428 aaKnown RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 OR4D1Q15615 310 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 NNATQ16517 81 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CLEC12BQ2HXU8 276 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 C10orf62Q5T681 223 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 OR2A2Q6IF42 318 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 AAGABQ6PD74 315 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF662Q6ZS27 426 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 SH2D5Q6ZV89 423 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 LRRC70Q7Z2Q7 622 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 NUP54Q7Z3B4 507 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 TRIM58Q8NG06 486 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 OR7G1Q8NGA0 311 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CAVIN3Q969G5 261 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 MCMBPQ9BTE3 642 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CD244Q9BZW8 370 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 DDX31Q9H8H2 851 aaKnown RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 LYARQ9NX58 379 aaKnown RBP10.27□□□□□ -0.77
BRCA1-213ENST00000476777 CD274Q9NZQ7 290 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 KLRF1Q9NZS2 232 aa10.27□□□□□ -0.77
BRCA1-213ENST00000476777 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-213ENST00000476777 FRG2CA6NGY1 282 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 SLC22A20A6NK97 555 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PGRMC2O15173 223 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PHF1O43189 567 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-213ENST00000476777 EMC8O43402 210 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 CD5LO43866 347 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 UGT2B11O75310 529 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PLAUP00749 431 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 FAM58BPP0C7Q3 252 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 CD1DP15813 335 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 SRD5A2P31213 254 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 BSGP35613 385 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PIK3CBP42338 1070 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 KCNJ5P48544 419 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 FNTAP49354 379 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 MGAT5Q09328 741 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 VEZF1Q14119 521 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PPP1R7Q15435 360 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 BEX5Q5H9J7 111 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 ANKRD34AQ69YU3 496 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF704Q6ZNC4 412 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-213ENST00000476777 P4HA3Q7Z4N8 544 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF611Q8N823 705 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 GRK7Q8WTQ7 553 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 OMA1Q96E52 524 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 ZNF845Q96IR2 970 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-213ENST00000476777 SFXN2Q96NB2 322 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 MTERF1Q99551 399 aaKnown RBP10.26□□□□□ -0.77
BRCA1-213ENST00000476777 CENPKQ9BS16 269 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 RHOJQ9H4E5 214 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 WDR41Q9HAD4 459 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 YAE1D1Q9NRH1 226 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 FBXL2Q9UKC9 423 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 TEX264Q9Y6I9 313 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 PCNX3Q9H6A9 2034 aa10.26□□□□□ -0.77
BRCA1-213ENST00000476777 FREM1Q5H8C1 2179 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 PRAMEF25A6NGN4 478 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 HS3ST1O14792 307 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 ZIC3O60481 467 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 TP53P04637 393 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CCDC166P0CW27 439 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CD8BP10966 210 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 TBXA2RP21731 343 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 IVDP26440 423 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 PIK3R1P27986 724 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 CLDN15P56746 228 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 ATP6V0D1P61421 351 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 SIRPAP78324 504 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 HMGCS1Q01581 520 aa10.25□□□□□ -0.77
BRCA1-213ENST00000476777 POU4F1Q01851 419 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms