RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 HSPA14Q0VDF9 509 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 UNC50Q53HI1 259 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 ISLR2Q6UXK2 745 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 PRSS42Q7Z5A4 293 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 EXOC6Q8TAG9 804 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 CFAP36Q96G28 342 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 ZNF560Q96MR9 790 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 ANP32EQ9BTT0 268 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 RNF41Q9H4P4 317 aaPredicted RBP4.66□□□□□ -1.66
SMC5-203ENST00000475540 ABCB10Q9NRK6 738 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 PNPLA3Q9NST1 481 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 SLC35D1Q9NTN3 355 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 TECRQ9NZ01 308 aaKnown RBP4.66□□□□□ -1.66
SMC5-203ENST00000475540 FAM205AQ6ZU69 1335 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 C5orf51A6NDU8 294 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 MEI4A8MW99 385 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 SBK2P0C263 348 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CT45A8P0DMV1 189 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CT45A9P0DMV2 189 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 MBL2P11226 248 aaPredicted RBP4.65□□□□□ -1.67
SMC5-203ENST00000475540 KRT13P13646 458 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 AREGP15514 252 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 RPA1P27694 616 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CCND2P30279 289 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 SFNP31947 248 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 PRKCEQ02156 737 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 DPYSQ14117 519 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CCDC40Q4G0X9 1142 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CT45A2Q5DJT8 189 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 PRAMEF8Q5VWM4 474 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 ZCCHC12Q6PEW1 402 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 ITIH5Q86UX2 942 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 SERPINA12Q8IW75 414 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 UBTD2Q8WUN7 234 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CYYR1Q96J86 154 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 ZIM3Q96PE6 472 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 TTYH2Q9BSA4 534 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CRACR2AQ9BSW2 395 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 TEX13AQ9BXU3 409 aaPredicted RBP4.65□□□□□ -1.67
SMC5-203ENST00000475540 AATFQ9NY61 560 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMC5-203ENST00000475540 Q9UF83 564 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 MLXQ9UH92 298 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CIDEBQ9UHD4 219 aa4.65□□□□□ -1.67
SMC5-203ENST00000475540 CLRN2A0PK11 232 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 SH3PXD2BA1X283 911 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 ARHGAP42A6NI28 874 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 SSX5O60225 188 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 HSF2BPO75031 334 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 CHRNGP07510 517 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 NUDT17P0C025 328 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 TPBGLP0DKB5 382 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 B4GALT1P15291 398 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 MAGEA4P43358 317 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 TNFSF10P50591 281 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 CDKL1Q00532 357 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 TSTA3Q13630 321 aaPredicted RBP4.64□□□□□ -1.67
SMC5-203ENST00000475540 STXBP2Q15833 593 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 STX1AQ16623 288 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 PPP1R3AQ16821 1122 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 KCTD11Q693B1 232 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 PRR22Q8IZ63 422 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 FBXW8Q8N3Y1 598 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 CCNYQ8ND76 341 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 NSMCE2Q96MF7 247 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 SPATA13Q96N96 652 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 TXN2Q99757 166 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 NTMT1Q9BV86 223 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 Q9HAA7 133 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 SLC25A19Q9HC21 320 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 KCNN3Q9UGI6 736 aa4.64□□□□□ -1.67
SMC5-203ENST00000475540 MRTO4Q9UKD2 239 aaKnown RBP4.64□□□□□ -1.67
SMC5-203ENST00000475540 CFAP73A6NFT4 308 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SLC15A5A6NIM6 579 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 K7ERI5 159 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SAP18O00422 153 aaKnown RBP4.63□□□□□ -1.67
SMC5-203ENST00000475540 TSPAN2O60636 221 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 PRAMEF12O95522 483 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 TGFAP01135 160 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SNRPCP09234 159 aaKnown RBP4.63□□□□□ -1.67
SMC5-203ENST00000475540 GIG44P09565 113 aaPredicted RBP4.63□□□□□ -1.67
SMC5-203ENST00000475540 CYP3A5P20815 502 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 FASP25445 335 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 CHRNA3P32297 505 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 IFNAR2P48551 515 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SLC7A2P52569 658 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 PDE7AQ13946 482 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 GSG1Q2KHT4 349 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 CGB2Q6NT52 195 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 PARP8Q8N3A8 854 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 OR52E1Q8NGJ3 308 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 OR4L1Q8NH43 312 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 GTSF1Q8WW33 167 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 FAM46BQ96A09 425 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 MRPL38Q96DV4 380 aaKnown RBP4.63□□□□□ -1.67
SMC5-203ENST00000475540 C14orf79Q96F83 325 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 PKNOX2Q96KN3 472 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 CXorf58Q96LI9 332 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SAMD8Q96LT4 415 aa4.63□□□□□ -1.67
SMC5-203ENST00000475540 SIGLEC12Q96PQ1 595 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms