RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ITLN2Q8WWU7 325 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 ASB5Q8WWX0 329 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 METTL21AQ8WXB1 218 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IRGQQ8WZA9 623 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 DHX58Q96C10 678 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ULK4Q96C45 1275 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SNRNP40Q96DI7 357 aaKnown RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 SCMH1Q96GD3 660 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SLC45A3Q96JT2 553 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 FAM71F1Q96KD3 344 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 PANX3Q96QZ0 392 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ZNF559Q9BR84 538 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 FAM213AQ9BRX8 229 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ATG101Q9BSB4 218 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 NUP58Q9BVL2 599 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LRRCC1Q9C099 1032 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 LINC00597Q9H2U6 94 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 C6orf106Q9H6K1 298 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 FKRPQ9H9S5 495 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 SYTL2Q9HCH5 934 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 GPN1Q9HCN4 374 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 DNAJC4Q9NNZ3 241 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 DUS2Q9NX74 493 aaKnown RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 C1RLQ9NZP8 487 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 MDFICQ9P1T7 246 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ACTR3BQ9P1U1 418 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 C19orf25Q9UFG5 118 aaPredicted RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 DAPK2Q9UIK4 370 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 APPL1Q9UKG1 709 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 AURKCQ9UQB9 309 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ZNF510Q9Y2H8 683 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 HBS1LQ9Y450 684 aaKnown RBP2.13□□□□□ -2.07
CALD1-216ENST00000473714 KIF3AQ9Y496 699 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 HES2Q9Y543 173 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 COLEC10Q9Y6Z7 277 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 ATP8B3O60423 1300 aa2.13□□□□□ -2.07
CALD1-216ENST00000473714 IGKV6D-21A0A0A0MT36 114 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 LY6G6EA0A0G2JKS1 128 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 A0A0G2JNG1 304 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TRBV2A0A0J9YWF9 115 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZCWPW2A0A1B0GU75 182 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 A0A1W2PP11 408 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 FAM90A10PA6NDY2 464 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CFAP73A6NFT4 308 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SLC9B1P1A6NJY1 282 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PRSS46E5RG02 174 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 E5RGE8 158 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 C19orf84I3L1E1 186 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 I3L4J1 428 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ARPC2O15144 300 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RNASEH1O60930 286 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 STBD1O95210 358 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 STSP08842 583 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ETS1P14921 441 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 AREGP15514 252 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CD27P26842 260 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TMOD1P28289 359 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SFNP31947 248 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 STIP1P31948 543 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 MAGEB1P43366 347 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 IER3P46695 156 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RABIFP47224 123 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CDX1P47902 265 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 ARCN1P48444 511 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 IFNAR2P48551 515 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TPMTP51580 245 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PGGT1BP53609 377 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 MTTPP55157 894 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 UCP2P55851 309 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KCNK10P57789 538 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 YBEYP58557 167 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 ABATP80404 500 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KDSRQ06136 332 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZNF415Q09FC8 603 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RASGEF1BQ0VAM2 473 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZNF155Q12901 538 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 TRAP1Q12931 704 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 PLD1Q13393 1074 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 MTF1Q14872 753 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KIR2DS5Q14953 304 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OPCMLQ14982 345 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 HFEQ30201 348 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 DEFB109BQ30KR1 87 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 UGT3A2Q3SY77 523 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PHLDA2Q53GA4 152 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZNF542PQ5EBM4 170 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 FGD3Q5JSP0 725 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 GRTP1Q5TC63 336 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KCTD11Q693B1 232 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR4A47Q6IF82 309 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PLXDC2Q6UX71 529 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CD300LGQ6UXG3 332 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 MACC1Q6ZN28 852 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RBM43Q6ZSC3 357 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 CREB3L2Q70SY1 520 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 Q75L30 129 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PRSS42Q7Z5A4 293 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TAF8Q7Z7C8 310 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RTN4RL2Q86UN3 420 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZNF410Q86VK4 478 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms