RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 NRG3P56975 720 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 PSPHP78330 225 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 ZNF766Q5HY98 468 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 CYP4Z2PQ8N1L4 340 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 PSMA8Q8TAA3 256 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 HSPBAP1Q96EW2 488 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 LCORQ96JN0 433 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-204ENST00000472959 SGCZQ96LD1 299 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 VSTM2LQ96N03 204 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 ITPAQ9BY32 194 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 ANKRA2Q9H9E1 313 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 C3orf14Q9HBI5 128 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 NEUROD4Q9HD90 331 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 DCTN4Q9UJW0 460 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 DTX4Q9Y2E6 619 aa19.21■□□□□ 0.67
TOP3A-204ENST00000472959 GPR55Q9Y2T6 319 aaPredicted RBP19.21■□□□□ 0.67
TOP3A-204ENST00000472959 CROCCQ5TZA2 2017 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 TTLL8A6PVC2 850 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 CAPN14A8MX76 684 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 RNASET2O00584 256 aaKnown RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 ZNF354AO60765 605 aaPredicted RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 SLC25A12O75746 678 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 SLC22A3O75751 556 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 PSMG1O95456 288 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 FBXO45P0C2W1 286 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 EFNA1P20827 205 aaPredicted RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 S100A3P33764 101 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 MRPL19P49406 292 aaKnown RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 ST13P50502 369 aaKnown RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 CDK9P50750 372 aaKnown RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 NME5P56597 212 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 INAQ16352 499 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 FAM174BQ3ZCQ3 159 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 OR4F3Q6IEY1 312 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 SLC25A25Q6KCM7 469 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 IL20RBQ6UXL0 311 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 ZNF227Q86WZ6 799 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 MIER2Q8N344 545 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 TMEM178AQ8NBL3 297 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 SCMH1Q96GD3 660 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 MAGED4Q96JG8 741 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 TEX37Q96LM6 180 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 BTBD9Q96Q07 612 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 NXF5Q9H1B4 397 aaKnown RBP19.2■□□□□ 0.66
TOP3A-204ENST00000472959 FOLH1BQ9HBA9 442 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 TIMMDC1Q9NPL8 285 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 FGFR1OP2Q9NVK5 253 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 LUZP4Q9P127 313 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 CPAMD8Q8IZJ3 1885 aa19.2■□□□□ 0.66
TOP3A-204ENST00000472959 KALRNO60229 2985 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 PRSS51A0A1B0GVH4 220 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 FRG2CA6NGY1 282 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 TTC36A6NLP5 189 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 TO15178 435 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 EMC8O43402 210 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 C6orf47O95873 294 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 SP1P08047 785 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 NAGAP17050 411 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 WNT3P56703 355 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 STX1BP61266 288 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 PRR5P85299 388 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 ZNF791Q3KP31 576 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-204ENST00000472959 COLEC12Q5KU26 742 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 SPANXN4Q5MJ08 99 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 LYPD8Q6UX82 237 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 RTL4Q6ZR62 310 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 GOLM1Q8NBJ4 401 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 RFWD2Q8NHY2 731 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 SPACA9Q96E40 222 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-204ENST00000472959 THOC1Q96FV9 657 aaKnown RBP19.19■□□□□ 0.66
TOP3A-204ENST00000472959 MARK4Q96L34 752 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 SIRT3Q9NTG7 399 aaPredicted RBP19.19■□□□□ 0.66
TOP3A-204ENST00000472959 FAM120CQ9NX05 1096 aaKnown RBP19.19■□□□□ 0.66
TOP3A-204ENST00000472959 PCDHGB4Q9UN71 923 aa19.19■□□□□ 0.66
TOP3A-204ENST00000472959 A0A0G2JND7 137 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 CFLARO15519 480 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 ERN1O75460 977 aaKnown RBP19.18■□□□□ 0.66
TOP3A-204ENST00000472959 IL6P05231 212 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 IL12AP29459 219 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 TMED10P49755 219 aaKnown RBP19.18■□□□□ 0.66
TOP3A-204ENST00000472959 LRRC74AQ0VAA2 488 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 ZNF155Q12901 538 aaPredicted RBP19.18■□□□□ 0.66
TOP3A-204ENST00000472959 ZNHIT3Q15649 155 aaPredicted RBP19.18■□□□□ 0.66
TOP3A-204ENST00000472959 TMEM64Q6YI46 380 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 MOAP1Q96BY2 351 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 RILPQ96NA2 401 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 ZNF317Q96PQ6 595 aaPredicted RBP19.18■□□□□ 0.66
TOP3A-204ENST00000472959 TMEM45AQ9NWC5 275 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 TRIM33Q9UPN9 1127 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 SNX8Q9Y5X2 465 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 NPFFR2Q9Y5X5 522 aa19.18■□□□□ 0.66
TOP3A-204ENST00000472959 NME2P1O60361 137 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 SCN2BO60939 215 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 PGRP06401 933 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 CT45A8P0DMV1 189 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 CT45A9P0DMV2 189 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 NME2P22392 152 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 CCT3P49368 545 aaKnown RBP19.17■□□□□ 0.66
TOP3A-204ENST00000472959 ATP4BP51164 291 aa19.17■□□□□ 0.66
TOP3A-204ENST00000472959 HBA1P69905 142 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms