RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FPR1P21462 350 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CHMP24386 653 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 PIK3R1P27986 724 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SPRP35270 261 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 HNRNPH2P55795 449 aaKnown RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 WNT3P56703 355 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 FBXW4P57775 412 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 RPS13P62277 151 aaKnown RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SNTA1Q13424 505 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CUL3Q13618 768 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 POU4F3Q15319 338 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ZKSCAN8Q15776 578 aaPredicted RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 KBTBD12Q3ZCT8 623 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 Q5PR19 223 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 LIPJQ5W064 366 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 C18orf63Q68DL7 685 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 TIGD3Q6B0B8 471 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SLC30A6Q6NXT4 461 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 POMZP3Q6PJE2 187 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 RAPH1Q70E73 1250 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CCDC91Q7Z6B0 441 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 KLHL7Q8IXQ5 586 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SLC35F6Q8N357 371 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SPATA6LQ8N4H0 392 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ZNF441Q8N8Z8 693 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 PYROXD1Q8WU10 500 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ESAMQ96AP7 390 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 WDYHV1Q96HA8 205 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 UBXN10Q96LJ8 280 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 GNRHR2Q96P88 292 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 RBBP8Q99708 897 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 MCMBPQ9BTE3 642 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 BDH2Q9BUT1 245 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ALG9Q9H6U8 611 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CAB39LQ9H9S4 337 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 GALNT8Q9NY28 637 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 MTO1Q9Y2Z2 717 aaKnown RBP8.32□□□□□ -1.08
CPSF4-211ENST00000471455 SLC6A5Q9Y345 797 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 ARID1AO14497 2285 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 DOCK7Q96N67 2140 aa8.32□□□□□ -1.08
CPSF4-211ENST00000471455 CSPG4Q6UVK1 2322 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 NCKAP5O14513 1909 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 TLN2Q9Y4G6 2542 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FN1P02751 2386 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 A0A0A6YYD5 115 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 GOLGA6L10A6NI86 522 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 EFCAB8A8MWE9 144 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 H0YIV9 168 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CCDC188H7C350 402 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 ACOX3O15254 700 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 EIF3HO15372 352 aaKnown RBP eCLIP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 GUCY1B2O75343 617 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 SEMA3DO95025 777 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 RCBTB2O95199 551 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 AIFM1O95831 613 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 GSTA2P09210 222 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FREM3P0C091 2139 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CPN1P15169 458 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PTPN6P29350 595 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CRABP2P29373 138 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 SSTR4P31391 388 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CASP3P42574 277 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PCYT1AP49585 367 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 AGFG1P52594 562 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PPP2R2BQ00005 443 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FUT7Q11130 342 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CALCOCO2Q13137 446 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 SLMAPQ14BN4 828 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FASTKD3Q14CZ7 662 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 EIPR1Q53HC9 387 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 WIPI1Q5MNZ9 446 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 C10orf62Q5T681 223 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 TMEM81Q6P7N7 255 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 AAGABQ6PD74 315 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PRSS57Q6UWY2 283 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 ANGPTL8Q6UXH0 198 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 DGAT2L6Q6ZPD8 337 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 Q71RC1 249 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 LUZP2Q86TE4 346 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 WFDC8Q8IUA0 241 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 GBP7Q8N8V2 638 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 SIMC1Q8NDZ2 872 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FAM83FQ8NEG4 500 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 OR4K14Q8NGD5 310 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 OR14L1PQ8NHC6 308 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 MTERF1Q99551 399 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 SORBS1Q9BX66 1292 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 OSBPL11Q9BXB4 747 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 OR10A5Q9H207 317 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 DDX31Q9H8H2 851 aaKnown RBP8.31□□□□□ -1.08
CPSF4-211ENST00000471455 CXorf21Q9HAI6 301 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PSD3Q9NYI0 1048 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 ZNF226Q9NYT6 803 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 KLRF1Q9NZS2 232 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 PACSIN3Q9UKS6 424 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 ASB4Q9Y574 426 aa8.31□□□□□ -1.08
CPSF4-211ENST00000471455 FBN3Q75N90 2809 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms