RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OXSR1O95747 527 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 CER1O95813 267 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 CHRM4P08173 479 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ALOX5P09917 674 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MSL3P1P0C860 447 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 SMIM18P0DKX4 95 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 IFNA8P32881 189 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 RPL5P46777 297 aaKnown RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MAN2A2P49641 1150 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 NR1H2P55055 460 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 HSD17B7P56937 341 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 NUP107P57740 925 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 GABARAPL2P60520 117 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 IGLV3-21P80748 117 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 CSTF1Q05048 431 aaKnown RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 STX4Q12846 297 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 BNIP3Q12983 259 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ZNHIT3Q15649 155 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MAPK11Q15759 364 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MICAQ29983 383 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ARHGAP11BQ3KRB8 267 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ZIK1Q3SY52 487 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 PLK5Q496M5 336 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 COLEC12Q5KU26 742 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 RBM48Q5RL73 367 aaKnown RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 FHL5Q5TD97 284 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 HEPHL1Q6MZM0 1159 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 FAM111BQ6SJ93 734 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF605Q86T29 641 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 C1orf210Q8IVY1 113 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 GALNT12Q8IXK2 581 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 GPR135Q8IZ08 494 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 OFCC1Q8IZS5 231 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 HS3ST5Q8IZT8 346 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 VWA5B2Q8N398 1253 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 SLC25A45Q8N413 288 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 LINC00471Q8N535 108 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 TSPAN14Q8NG11 270 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 OR10G2Q8NGC3 310 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 OR5T3Q8NGG3 340 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 OR4C15Q8NGM1 316 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 OR4C6Q8NH72 309 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 APOBEC4Q8WW27 367 aaKnown RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 PMM1Q92871 262 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 NAT6Q93015 286 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 GIMAP5Q96F15 307 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 PRRX2Q99811 253 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 APOL4Q9BPW4 351 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 AMBRA1Q9C0C7 1298 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 PIGUQ9H490 435 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 RIBC2Q9H4K1 309 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF556Q9HAH1 456 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 POLE3Q9NRF9 147 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 PRTFDC1Q9NRG1 225 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 DUSP22Q9NRW4 184 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MAT2BQ9NZL9 334 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 HCN3Q9P1Z3 774 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 KLHL3Q9UH77 587 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 KCND3Q9UK17 655 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 TMCC3Q9ULS5 477 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 CDC14AQ9UNH5 594 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 IFT52Q9Y366 437 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MAGED1Q9Y5V3 778 aaPredicted RBP8.75□□□□□ -1.01
SMC1A-205ENST00000469129 MUC6Q6W4X9 2439 aa8.75□□□□□ -1.01
SMC1A-205ENST00000469129 WDFY4Q6ZS81 3184 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 LOC100130705A0A1B0GUX0 176 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 A0A1W2PS29 197 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 TMEM150CB9EJG8 249 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 FAAHO00519 579 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 HCRTR1O43613 425 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 FOXS1O43638 330 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 CTNSO60931 367 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 OR2B3O76000 313 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SEC24DO94855 1032 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 GNAO1P09471 354 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ANKRD34CP0C6C1 535 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PABPC4LP0CB38 370 aaKnown RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 TNFRSF1BP20333 461 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PRKAR1BP31321 381 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 GALNSP34059 522 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 RYKP34925 604 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PTGER1P34995 402 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 OR1E2P47887 323 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 DAPP51397 102 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 HMGA2P52926 109 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 NUBP1P53384 320 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 OR1D5P58170 312 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 IL1RL1Q01638 556 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 FUT5Q11128 374 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF155Q12901 538 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SLC13A2Q13183 592 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SERTAD2Q14140 314 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 SHBQ15464 509 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 CLPPQ16740 277 aaPredicted RBP8.74□□□□□ -1.01
SMC1A-205ENST00000469129 EXOC3L2Q2M3D2 409 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 PRICKLE4Q2TBC4 344 aa8.74□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF311Q5JNZ3 666 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms