RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-209	ENST00000468872	SNX1	Q13596	522 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ENPP2	Q13822	863 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	FAAP20	Q6NZ36	180 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	DPY19L2P2	Q6ZN68	376 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	CATSPER4	Q7RTX7	472 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	RNF130	Q86XS8	419 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	MLKL	Q8NB16	471 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	NPRL2	Q8WTW4	380 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF689	Q96CS4	500 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF597	Q96LX8	424 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ANKRD27	Q96NW4	1050 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	TRIM51	Q9BSJ1	452 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	CABLES2	Q9BTV7	478 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	NACA2	Q9H009	215 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	EIF3K	Q9UBQ5	218 aa	Known RBP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	IKZF3	Q9UKT9	509 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	ISY1	Q9ULR0	285 aa	Known RBP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	FBXO7	Q9Y3I1	522 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	AKNA	Q7Z591	1439 aa		4.12	□□□□□ -1.75
LSM5-209	ENST00000468872	CDK13	Q14004	1512 aa	Known RBP	4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	PDE4DIP	Q5VU43	2346 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872		A0A0A6YYD4	124 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	KRTAP16-1	A8MUX0	517 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	OAS1	P00973	400 aa	Known RBP	4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	IL4R	P24394	825 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	MATK	P42679	507 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	SGSH	P51688	502 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	KRTAP10-3	P60369	221 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	NAAA	Q02083	359 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	EMC2	Q15006	297 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	INA	Q16352	499 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	CCL14	Q16627	93 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF699	Q32M78	642 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	TTC31	Q49AM3	519 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	ADCK1	Q86TW2	530 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	PYROXD2	Q8N2H3	581 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	FCGR1B	Q92637	280 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	TAF4B	Q92750	862 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	CCDC51	Q96ER9	411 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	VGLL1	Q99990	258 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	CHCHD5	Q9BSY4	110 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	NDUFAF3	Q9BU61	184 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	TUBB1	Q9H4B7	451 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	NRN1	Q9NPD7	142 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	TAS2R16	Q9NYV7	291 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	RARRES3	Q9UL19	164 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	SPATA2	Q9UM82	520 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	ATP8B3	O60423	1300 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	CHD4	Q14839	1912 aa		4.11	□□□□□ -1.75
LSM5-209	ENST00000468872	ROBO1	Q9Y6N7	1651 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872		A0A0J9YWU9	116 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	BCLAF3	A2AJT9	711 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	BUB1	O43683	1085 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	STK17B	O94768	372 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	AKR7A3	O95154	331 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	HCK	P08631	526 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	GP9	P14770	177 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	CCND2	P30279	289 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	SLC1A4	P43007	532 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	GSK3B	P49841	420 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	RIDA	P52758	137 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	POLR2F	P61218	127 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	PAX8	Q06710	450 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	LRIT3	Q3SXY7	679 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ACSF3	Q4G176	576 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	GLIPR1L2	Q4G1C9	344 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ERC1	Q8IUD2	1116 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	PHC2	Q8IXK0	858 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ABHD12	Q8N2K0	398 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872		Q8N377	158 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	SAMD12	Q8N8I0	201 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ATF6B	Q99941	703 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	HSD17B14	Q9BPX1	270 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ST6GALNAC5	Q9BVH7	336 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	RAB11FIP5	Q9BXF6	653 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	CCSER1	Q9C0I3	900 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	IL1RL2	Q9HB29	575 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF446	Q9NWS9	450 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	BCAP29	Q9UHQ4	241 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	MGAT4A	Q9UM21	535 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	AUP1	Q9Y679	476 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	ADAMTS12	P58397	1594 aa		4.1	□□□□□ -1.75
LSM5-209	ENST00000468872	TEX48	A0A1B0GUV7	120 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	RNF212B	A8MTL3	300 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872		F8WDY8	70 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	SEMA4F	O95754	770 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	IGHG3	P01860	377 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	LMO2	P25791	158 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	UCP1	P25874	307 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	DPYS	Q14117	519 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	AGAP7P	Q5VUJ5	663 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	ZNF343	Q6P1L6	599 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	GOLGA7	Q7Z5G4	137 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	LUZP1	Q86V48	1076 aa		4.09	□□□□□ -1.75
LSM5-209	ENST00000468872	CATSPER3	Q86XQ3	398 aa		4.09	□□□□□ -1.75

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