RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MORN4Q8NDC4 146 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR5M3Q8NGP4 307 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 TEX47Q8TBZ9 253 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 RAET1EQ8TD07 263 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 UBE2E3Q969T4 207 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 ZNF764Q96H86 408 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 FOPNLQ96NB1 174 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SORCS2Q96PQ0 1159 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SLC38A2Q96QD8 506 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 C17orf62Q9BQA9 187 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 FNDC11Q9BVV2 318 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 SGPP1Q9BX95 441 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 BTBD1Q9H0C5 482 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HDHD2Q9H0R4 259 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 OR51B5Q9H339 312 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 GHITMQ9H3K2 345 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CYSLTR2Q9NS75 346 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MAN2C1Q9NTJ4 1040 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 CUEDC1Q9NWM3 386 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 MGAT4AQ9UM21 535 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 HELZP42694 1942 aaKnown RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 PLXNA2O75051 1894 aa6.89□□□□□ -1.31
USP48-206ENST00000464577 KIF26AQ9ULI4 1882 aaPredicted RBP6.89□□□□□ -1.31
USP48-206ENST00000464577 A0A1B0GVI7 797 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RPS10-NUDT3A0A1W2PQS6 291 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SHISA3A0PJX4 238 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TMEM202A6NGA9 273 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TUBAL3A6NHL2 446 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ANHXE9PGG2 379 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 HMGN4O00479 90 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 LRRTM2O43300 516 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TSPAN6O43657 245 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TSC22D2O75157 780 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NCR1O76036 304 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NFATC1O95644 943 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 TGFB1P01137 390 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 IFNA7P01567 189 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 IGHA1P01876 353 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR12D1P0DN82 309 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NPPBP16860 134 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NAGAP17050 411 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ELK1P19419 428 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 DDCP20711 480 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CST5P28325 142 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 SOX18P35713 384 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SLC6A11P48066 632 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RFX3P48380 749 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PRLHRP49683 370 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RPS26P62854 115 aaKnown RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 SHC2P98077 582 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 BDH1Q02338 343 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF155Q12901 538 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 MFSD13AQ14CX5 517 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 KCNA10Q16322 511 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF284Q2VY69 593 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 MPPE1Q53F39 396 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 KLHL12Q53G59 568 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CCSAPQ6IQ19 270 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 SLC27A4Q6P1M0 643 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 C17orf99Q6UX52 265 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 FAM83HQ6ZRV2 1179 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 TAS1R1Q7RTX1 841 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 IQCHQ86VS3 1027 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 FIBINQ8TAL6 211 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 GNPDA2Q8TDQ7 276 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ZNF480Q8WV37 535 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NR4A3Q92570 626 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RFKQ969G6 155 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PHF21AQ96BD5 680 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RADILQ96JH8 1075 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PRRC1Q96M27 445 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SLCO1C1Q9NYB5 712 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SEC14L3Q9UDX4 400 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CD84Q9UIB8 345 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 LIPT1Q9Y234 373 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 HS3ST2Q9Y278 367 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 EXOGQ9Y2C4 368 aaKnown RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 SLC9A8Q9Y2E8 581 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 NUBP2Q9Y5Y2 271 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CACNG2Q9Y698 323 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ANKDD1BA6NHY2 528 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 FAM170BA6NMN3 283 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 I3L521 148 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 SAP18O00422 153 aaKnown RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 SEPT4O43236 478 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 ATG13O75143 517 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 RGS9O75916 674 aaPredicted RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 APOL3O95236 402 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 POP4O95707 220 aaKnown RBP6.88□□□□□ -1.31
USP48-206ENST00000464577 OLFM2O95897 454 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 LALBAP00709 142 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 GALTP07902 379 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 CTSAP10619 480 aa6.88□□□□□ -1.31
USP48-206ENST00000464577 PEPDP12955 493 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms