RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 RAG2P55895 527 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 PAX8Q06710 450 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 LRRC74AQ0VAA2 488 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 ELAVL2Q12926 359 aaKnown RBP3.79□□□□□ -1.8
USP25-207ENST00000464435 LRIT3Q3SXY7 679 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 PAQR6Q6TCH4 344 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 REG3GQ6UW15 175 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 ERASQ7Z444 233 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 LUZP1Q86V48 1076 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 ARFGAP2Q8N6H7 521 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 BCORP1Q8N888 145 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 SAMD12Q8N8I0 201 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 DENND6BQ8NEG7 585 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 OR52B4Q8NGK2 314 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 OR4Q3Q8NH05 313 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 U2AF1L4Q8WU68 220 aaKnown RBP3.79□□□□□ -1.8
USP25-207ENST00000464435 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 CCDC51Q96ER9 411 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 CPXM1Q96SM3 734 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 HSD17B14Q9BPX1 270 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 TRIM51Q9BSJ1 452 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 APOOQ9BUR5 198 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 TUBB1Q9H4B7 451 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 POLE3Q9NRF9 147 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 AATFQ9NY61 560 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP25-207ENST00000464435 RABL2AQ9UBK7 228 aaPredicted RBP3.79□□□□□ -1.8
USP25-207ENST00000464435 BCAP29Q9UHQ4 241 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 RARRES3Q9UL19 164 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 ZNF490Q9ULM2 529 aaPredicted RBP3.79□□□□□ -1.8
USP25-207ENST00000464435 MGAT4AQ9UM21 535 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 SPATA2Q9UM82 520 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 RNF115Q9Y4L5 304 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 AUP1Q9Y679 476 aa3.79□□□□□ -1.8
USP25-207ENST00000464435 IGKV3D-20A0A0C4DH25 116 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 IGHV3-16A0A0C4DH30 117 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 A0A0U1RQV5 110 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 RPL37AP8A6NKH3 93 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 F8WDY8 70 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 K7ERI5 159 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 LGALS8O00214 317 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 PEX11AO75192 247 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 TBX6O95947 436 aaPredicted RBP3.78□□□□□ -1.8
USP25-207ENST00000464435 RPS2P15880 293 aaKnown RBP3.78□□□□□ -1.8
USP25-207ENST00000464435 LMO2P25791 158 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 CCND2P30279 289 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 DPYSQ14117 519 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 PCK2Q16822 640 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ACSF3Q4G176 576 aaPredicted RBP3.78□□□□□ -1.8
USP25-207ENST00000464435 SEL1L2Q5TEA6 688 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 AGAP7PQ5VUJ5 663 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ZNF343Q6P1L6 599 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 CCDC73Q6ZRK6 1079 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 GPRIN3Q6ZVF9 776 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 MOB2Q70IA6 237 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 GOLGA7Q7Z5G4 137 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 GPBP1Q86WP2 473 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 CATSPER3Q86XQ3 398 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ABHD12Q8N2K0 398 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 CERS5Q8N5B7 392 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 SUMF1Q8NBK3 374 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 WDR36Q8NI36 951 aaKnown RBP3.78□□□□□ -1.8
USP25-207ENST00000464435 NCLNQ969V3 563 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ATF6BQ99941 703 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ALG9Q9H6U8 611 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 ECT2Q9H8V3 914 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 JPT2Q9H910 190 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 P2RX2Q9UBL9 471 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 HPCAL4Q9UM19 191 aa3.78□□□□□ -1.8
USP25-207ENST00000464435 RNF222A6NCQ9 220 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 RNF212BA8MTL3 300 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 SHISA9B4DS77 424 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 PDXKO00764 312 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 CYB561D2O14569 222 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 MCF2LO15068 1137 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 CFLARO15519 480 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 RANBP6O60518 1105 aaKnown RBP3.77□□□□□ -1.81
USP25-207ENST00000464435 SCGB2A1O75556 95 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 SNX4O95219 450 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 DIRAS3O95661 229 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 APBB3O95704 486 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 FCGR3AP08637 254 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 NCF1P14598 390 aaPredicted RBP3.77□□□□□ -1.81
USP25-207ENST00000464435 GP9P14770 177 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 CALML3P27482 149 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 IFNAR2P48551 515 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 PRELPP51888 382 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 RIDAP52758 137 aaKnown RBP3.77□□□□□ -1.81
USP25-207ENST00000464435 MTTPP55157 894 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 HAND2P61296 217 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 PRKCEQ02156 737 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 ACY1Q03154 408 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 MRPL28Q13084 256 aaKnown RBP3.77□□□□□ -1.81
USP25-207ENST00000464435 SLC1A5Q15758 541 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 SNAI3Q3KNW1 292 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 ADPRMQ3LIE5 342 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 C9orf66Q5T8R8 295 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 RFWD3Q6PCD5 774 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 RGS9BPQ6ZS82 235 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 STXBP4Q6ZWJ1 553 aa3.77□□□□□ -1.81
USP25-207ENST00000464435 PRSS48Q7RTY5 328 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms