RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SFXN2Q96NB2 322 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 NODALQ96S42 347 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 OPN3Q9H1Y3 402 aaPredicted RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 DDX31Q9H8H2 851 aaKnown RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 CAB39LQ9H9S4 337 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 MOCS1Q9NZB8 636 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 CFL2Q9Y281 166 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
SMC1A-204ENST00000463684 JRKLQ9Y4A0 524 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 PCDHGA11Q9Y5H2 935 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 WIF1Q9Y5W5 379 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 STAB1Q9NY15 2570 aa13.11□□□□□ -0.31
SMC1A-204ENST00000463684 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 SLC22A20A6NK97 555 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 K7EPI3 171 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PGRMC2O15173 223 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PHGDHO43175 533 aaKnown RBP13.1□□□□□ -0.31
SMC1A-204ENST00000463684 HCRTR2O43614 444 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 TMPRSS11DO60235 418 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 AIFM1O95831 613 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF708P17019 499 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 NT5EP21589 574 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 GPX3P22352 226 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 SRD5A2P31213 254 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PTGDSP41222 190 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 XKP51811 444 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ARL4CP56559 192 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PLCXD2Q0VAA5 305 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 MORF4L2Q15014 288 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 NNATQ16517 81 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 BTLAQ7Z6A9 289 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PLCZ1Q86YW0 608 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 WDSUB1Q8N9V3 476 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 REPS1Q96D71 796 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 OMA1Q96E52 524 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF845Q96IR2 970 aaPredicted RBP13.1□□□□□ -0.31
SMC1A-204ENST00000463684 MARK4Q96L34 752 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 PIGQQ9BRB3 760 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF701Q9NV72 531 aaPredicted RBP13.1□□□□□ -0.31
SMC1A-204ENST00000463684 TXNDC16Q9P2K2 825 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ANGPTL3Q9Y5C1 460 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 FREM3P0C091 2139 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 ARID1AO14497 2285 aa13.1□□□□□ -0.31
SMC1A-204ENST00000463684 A0A1W2PS29 197 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 PRAMEF25A6NGN4 478 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 WISP3O95389 354 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-204ENST00000463684 STMN1P16949 149 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 CNTFP26441 200 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 BSGP35613 385 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 NR1H2P55055 460 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 CLDN18P56856 261 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 CUL3Q13618 768 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 BCL2A1Q16548 175 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 ANKRD34AQ69YU3 496 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 NUDT13Q86X67 352 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 STAG3L4Q8TBR4 150 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 ACTRT1Q8TDG2 376 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 CAVIN3Q969G5 261 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 LCORQ96JN0 433 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-204ENST00000463684 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
SMC1A-204ENST00000463684 KLHL4Q9C0H6 718 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 NUDT4Q9NZJ9 180 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 BCAP29Q9UHQ4 241 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 DKKL1Q9UK85 242 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 MRPS18CQ9Y3D5 142 aaKnown RBP13.09□□□□□ -0.31
SMC1A-204ENST00000463684 TSC22D4Q9Y3Q8 395 aa13.09□□□□□ -0.31
SMC1A-204ENST00000463684 MXRA5Q9NR99 2828 aa13.08□□□□□ -0.31
SMC1A-204ENST00000463684 TLN2Q9Y4G6 2542 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 LRRC14BA6NHZ5 514 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 SUPT3HB4E1H0 165 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 ACOX3O15254 700 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 UGT2B11O75310 529 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 SUPT3HO75486 399 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 GBAP04062 536 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 PORP16435 677 aaPredicted RBP13.08□□□□□ -0.32
SMC1A-204ENST00000463684 TBXA2RP21731 343 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 IVDP26440 423 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 LOXP28300 417 aaPredicted RBP13.08□□□□□ -0.32
SMC1A-204ENST00000463684 GMPRP36959 345 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 KIR2DL2P43627 348 aaPredicted RBP13.08□□□□□ -0.32
SMC1A-204ENST00000463684 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.32
SMC1A-204ENST00000463684 SIRPAP78324 504 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 KRTAP1-1Q07627 177 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 VEZF1Q14119 521 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 CAPRIN1Q14444 709 aaKnown RBP13.08□□□□□ -0.32
SMC1A-204ENST00000463684 FGFBP1Q14512 234 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 CLEC12BQ2HXU8 276 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 LIPJQ5W064 366 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 SH2D5Q6ZV89 423 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 FBXO36Q8NEA4 188 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 ADCY4Q8NFM4 1077 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.32
SMC1A-204ENST00000463684 MCMBPQ9BTE3 642 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms