RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 KRT15P19012 456 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 AGFG1P52594 562 aaKnown RBP18.06■□□□□ 0.48
VARS-221ENST00000463184 ALDH18A1P54886 795 aaKnown RBP18.06■□□□□ 0.48
VARS-221ENST00000463184 RCAN2Q14206 197 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 RASA2Q15283 850 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 PCBP2Q15366 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
VARS-221ENST00000463184 PFKFB4Q16877 469 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 FAM83EQ2M2I3 478 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 EIPR1Q53HC9 387 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 C6orf163Q5TEZ5 329 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 TIGD3Q6B0B8 471 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 BIVMQ86UB2 503 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 L3MBTL4Q8NA19 623 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 OR4K14Q8NGD5 310 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 WDR20Q8TBZ3 569 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 VPS11Q9H270 941 aa18.06■□□□□ 0.48
VARS-221ENST00000463184 CCDC151A5D8V7 595 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 CLCA1A8K7I4 914 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 GNB5O14775 395 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 SEMA3DO95025 777 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 ACTL6AO96019 429 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 CT62P0C5K7 136 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 NAGAP17050 411 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 ABCD3P28288 659 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 PTPN6P29350 595 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 PIK3CGP48736 1102 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 XKP51811 444 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 NEK2P51955 445 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 GTF2H2Q13888 395 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 ACAP2Q15057 778 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 WIPI1Q5MNZ9 446 aaPredicted RBP18.05■□□□□ 0.48
VARS-221ENST00000463184 GTF2H2CQ6P1K8 395 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 METTL2BQ6P1Q9 378 aaKnown RBP18.05■□□□□ 0.48
VARS-221ENST00000463184 TMEM81Q6P7N7 255 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 WFDC11Q8NEX6 87 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 OR1J4Q8NGS1 313 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 KCTD4Q8WVF5 259 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 SERPINI1Q99574 410 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 YIPF4Q9BSR8 244 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 ROPN1BQ9BZX4 212 aaPredicted RBP18.05■□□□□ 0.48
VARS-221ENST00000463184 IPPKQ9H8X2 491 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 ROPN1Q9HAT0 212 aaPredicted RBP18.05■□□□□ 0.48
VARS-221ENST00000463184 NEUROD4Q9HD90 331 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 TBK1Q9UHD2 729 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 RNF11Q9Y3C5 154 aa18.05■□□□□ 0.48
VARS-221ENST00000463184 TNPO3Q9Y5L0 923 aaKnown RBP18.05■□□□□ 0.48
VARS-221ENST00000463184 ABCA2Q9BZC7 2435 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 A0A1W2PS29 197 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 CTIFO43310 598 aaKnown RBP18.04■□□□□ 0.48
VARS-221ENST00000463184 KLHL2O95198 593 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 GBAP04062 536 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 ABCB1P08183 1280 aaPredicted RBP18.04■□□□□ 0.48
VARS-221ENST00000463184 COL6A2P12110 1019 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 HOXC12P31275 282 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 GCKP35557 465 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 SLCO1A2P46721 670 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 NAGLUP54802 743 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 IRF9Q00978 393 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 IFFO1Q0D2I5 559 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 DCST1Q5T197 706 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 GOLGA7Q7Z5G4 137 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 PRR22Q8IZ63 422 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 CENPLQ8N0S6 344 aaPredicted RBP18.04■□□□□ 0.48
VARS-221ENST00000463184 FAM83FQ8NEG4 500 aaPredicted RBP18.04■□□□□ 0.48
VARS-221ENST00000463184 OR2W6PQ8NHA6 318 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 EPS8L3Q8TE67 593 aaKnown RBP18.04■□□□□ 0.48
VARS-221ENST00000463184 DACH2Q96NX9 599 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 METTL7AQ9H8H3 244 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 CFL2Q9Y281 166 aa18.04■□□□□ 0.48
VARS-221ENST00000463184 ERN1O75460 977 aaKnown RBP18.03■□□□□ 0.48
VARS-221ENST00000463184 PPM1BO75688 479 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 CLDN9O95484 217 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 TMIGD3P0DMS9 266 aaPredicted RBP18.03■□□□□ 0.48
VARS-221ENST00000463184 CYP4B1P13584 511 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 CPMP14384 443 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 CPN1P15169 458 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 NT5EP21589 574 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 GPX3P22352 226 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 SLC30A6Q6NXT4 461 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 ANGPTL8Q6UXH0 198 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 NUP54Q7Z3B4 507 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 YRDCQ86U90 279 aaKnown RBP18.03■□□□□ 0.48
VARS-221ENST00000463184 RIBC1Q8N443 379 aaPredicted RBP18.03■□□□□ 0.48
VARS-221ENST00000463184 C9orf106Q8NAJ2 232 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 MZB1Q8WU39 189 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 ZFP3Q96NJ6 502 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 SFXN3Q9BWM7 321 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 RBM24Q9BX46 236 aaKnown RBP18.03■□□□□ 0.48
VARS-221ENST00000463184 AHSPQ9NZD4 102 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 ADAM29Q9UKF5 820 aa18.03■□□□□ 0.48
VARS-221ENST00000463184 FLNAP21333 2647 aaKnown RBP18.02■□□□□ 0.48
VARS-221ENST00000463184 KIAA1549Q9HCM3 1950 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 LRRC14BA6NHZ5 514 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 SMIM23A6NLE4 172 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 HRGP04196 525 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 PORP16435 677 aaPredicted RBP18.02■□□□□ 0.48
VARS-221ENST00000463184 S1PR1P21453 382 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 DCAF7P61962 342 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 SNTA1Q13424 505 aa18.02■□□□□ 0.48
VARS-221ENST00000463184 TSNAXIP1Q2TAA8 658 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms