RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 BHLHB9Q6PI77 547 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 RNF130Q86XS8 419 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 HORMAD2Q8N7B1 307 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 ART5Q96L15 291 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 VSTM2LQ96N03 204 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 MS4A4EQ96PG1 132 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 LPAR4Q99677 370 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 CNPPD1Q9BV87 410 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 GPN2Q9H9Y4 310 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
COL6A1-202ENST00000463060 HEMK1Q9Y5R4 338 aaPredicted RBP13.34□□□□□ -0.27
COL6A1-202ENST00000463060 SEC24DO94855 1032 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 ETFAP13804 333 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 HSD17B1P14061 328 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 MATN1P21941 496 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 GSK3BP49841 420 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SLC26A5P58743 744 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 TXNL4AP83876 142 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 LIPEQ05469 1076 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 EEF1A2Q05639 463 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 FADDQ13158 208 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 LASP1Q14847 261 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 MAPK11Q15759 364 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 FXNQ16595 210 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 AP1ARQ63HQ0 302 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 CDC73Q6P1J9 531 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 NDUFAF7Q7L592 441 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SERPINA11Q86U17 422 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 PTOV1Q86YD1 416 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 LGI4Q8N135 537 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SLC16A11Q8NCK7 471 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 OR10A6Q8NH74 314 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 C16orf52Q8NHV5 167 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 PNPT1Q8TCS8 783 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 THTPAQ9BU02 230 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 ACTRT3Q9BYD9 372 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 OR8D2Q9GZM6 311 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 MMADHCQ9H3L0 296 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 ADA2Q9NZK5 511 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 PACSIN3Q9UKS6 424 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 USP22Q9UPT9 525 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 CORO2BQ9UQ03 480 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 DTX4Q9Y2E6 619 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 KCNE3Q9Y6H6 103 aa13.33□□□□□ -0.28
COL6A1-202ENST00000463060 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
COL6A1-202ENST00000463060 PRAMEF27A3QJZ7 478 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 TMEM200CA6NKL6 621 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 OR6C76A6NM76 312 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 HMGN4O00479 90 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ASNA1O43681 348 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 DYRK3O43781 588 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 PRAMEF2O60811 474 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 DNAJA2O60884 412 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 COQ9O75208 318 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 NKX2-2O95096 273 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 NUDT7P0C024 238 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ACP2P11117 423 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 PGM1P36871 562 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 CASP9P55211 416 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 RPS26P62854 115 aaKnown RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 PSG6Q00889 435 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 SRSF6Q13247 344 aaKnown RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 MYBPC3Q14896 1274 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 C6orf163Q5TEZ5 329 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 PLAG1Q6DJT9 500 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 MRGPREQ86SM8 312 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 VASH2Q86V25 355 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ZNF441Q8N8Z8 693 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 OR8K3Q8NH51 312 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 M1APQ8TC57 530 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 GATA6Q92908 595 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 NCLNQ969V3 563 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ADIPOR1Q96A54 375 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 KIAA1143Q96AT1 154 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 CLPTM1LQ96KA5 538 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 SLC35G5Q96KT7 338 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 ECSITQ9BQ95 431 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 EFHD1Q9BUP0 239 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 OR51I1Q9H343 314 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 TMEM38AQ9H6F2 299 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 FOLH1BQ9HBA9 442 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 DUSP22Q9NRW4 184 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 P4HTMQ9NXG6 502 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
COL6A1-202ENST00000463060 GPR55Q9Y2T6 319 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-202ENST00000463060 L3MBTL1Q9Y468 752 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms