RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PQLC2Q6ZP29 291 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TMEM126BQ8IUX1 230 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 SPATA6LQ8N4H0 392 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TM9SF4Q92544 642 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 NR4A3Q92570 626 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 ERGIC1Q969X5 290 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 PHF21BQ96EK2 531 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 CELF6Q96J87 481 aaKnown RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 FER1L6-AS2Q96M78 137 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TAAR6Q96RI8 345 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TIMM29Q9BSF4 260 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 TMEM121Q9BTD3 319 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 RIOK2Q9BVS4 552 aaKnown RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 CCDC68Q9H2F9 335 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 GHITMQ9H3K2 345 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 MAGIXQ9H6Y5 334 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 RANGRFQ9HD47 186 aaPredicted RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 P4HTMQ9NXG6 502 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 NFKBIL1Q9UBC1 381 aaPredicted RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 NOCTQ9UK39 431 aaKnown RBP4.49□□□□□ -1.69
COPS3-204ENST00000462236 DNAJC12Q9UKB3 198 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 MED12LQ86YW9 2145 aa4.49□□□□□ -1.69
COPS3-204ENST00000462236 NCKAP5O14513 1909 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 FAM90A8PA6NJQ4 464 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 SIGLEC16A6NMB1 481 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OR52A4PA6NMU1 304 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 TIMM23O14925 209 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OR2C1O95371 312 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 LCA5LO95447 670 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 NADKO95544 446 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 ZBTB11O95625 1053 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 CH25HO95992 272 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 UMODP07911 640 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 FAM90A13PP0C7W8 464 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 FAM90A24PP0C7X0 464 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 ZNF7P17097 686 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 ERCC2P18074 760 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 C21orf33P30042 268 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 STX2P32856 288 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 PPP1R2P41236 205 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 GABRA4P48169 554 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 SPINT3P49223 89 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 KPNA2P52292 529 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 ART1P52961 327 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 MRPS34P82930 218 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 TLE4Q04727 773 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 KRTAP1-1Q07627 177 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 DMPKQ09013 629 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 DPYSQ14117 519 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 INAQ16352 499 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 CA9Q16790 459 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 ARMC12Q5T9G4 340 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 SIGIRRQ6IA17 410 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 TYW3Q6IPR3 259 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 FAM122CQ6P4D5 195 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 ZNF549Q6P9A3 640 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 Q6ZPB1 254 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 TAOK1Q7L7X3 1001 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 ZC3HC1Q86WB0 502 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 TEX26Q8N6G2 289 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 IQCF1Q8N6M8 205 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 BCORP1Q8N888 145 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 CLEC1AQ8NC01 280 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OR2Y1Q8NGV0 311 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OR1L3Q8NH93 324 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OIT3Q8WWZ8 545 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 NELFBQ8WX92 580 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 RRNAD1Q96FB5 475 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 WDFY2Q96P53 400 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 FOXC2Q99958 501 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 MLPHQ9BV36 600 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 NDST4Q9H3R1 872 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 SYTL2Q9HCH5 934 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 OLAHQ9NV23 265 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 CWC15Q9P013 229 aaKnown RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 MAN1B1Q9UKM7 699 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 DNPEPQ9ULA0 475 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 TTC7AQ9ULT0 858 aaPredicted RBP4.48□□□□□ -1.69
COPS3-204ENST00000462236 CDC14AQ9UNH5 594 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 ZNF835Q9Y2P0 537 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 CR1P17927 2039 aa4.48□□□□□ -1.69
COPS3-204ENST00000462236 DYSFO75923 2080 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 BICDL2A1A5D9 508 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 RGSL1A5PLK6 1076 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 PTGES3LE9PB15 166 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 IFNL4K9M1U5 179 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 CCL21O00585 134 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 SOCS6O14544 535 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 KMOO15229 486 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 ZIC3O60481 467 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 KCNJ13O60928 360 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 WISP2O76076 250 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 NKX2-2O95096 273 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 CLDN14O95500 239 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 FTCDO95954 541 aa4.47□□□□□ -1.69
COPS3-204ENST00000462236 KRT3P12035 628 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms