RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZNF232Q9UNY5 417 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 SLC17A4Q9Y2C5 497 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 TRIOBPQ9H2D6 2365 aa8.34□□□□□ -1.07
HDAC3-202ENST00000459727 KIAA1549LQ6ZVL6 1849 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 LINC01553A4QN01 128 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 KDM4EB2RXH2 506 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 RTCAO00442 366 aaKnown RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ERI3O43414 337 aaKnown RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 GPX5O75715 221 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 UBXN7O94888 489 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 KAT7O95251 611 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SOX14O95416 240 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SERPIND1P05546 499 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 THBS1P07996 1170 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 F3P13726 295 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 TNNI3P19429 210 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MMP11P24347 488 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ATP5A1P25705 553 aaKnown RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 TLX1P31314 330 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SDC2P34741 201 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 CRYBB2P43320 205 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MTNR1AP48039 350 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SLC6A11P48066 632 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PPP3R1P63098 170 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PSPHP78330 225 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ACSM1Q08AH1 577 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 GPR50Q13585 617 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 TPBGQ13641 420 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 RUNX3Q13761 415 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 GINS1Q14691 196 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 LARS2Q15031 903 aaKnown RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 IRF4Q15306 451 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SNAPC1Q16533 368 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 DECR1Q16698 335 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ZSWIM7Q19AV6 140 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PRSS53Q2L4Q9 553 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 GPAT3Q53EU6 434 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 CCDC92Q53HC0 331 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF311Q5JNZ3 666 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 AGAP6Q5VW22 663 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 XKRXQ6PP77 449 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 WASH2PQ6VEQ5 465 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF730Q6ZMV8 503 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MTSS1LQ765P7 747 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 C16orf62Q7Z3J2 963 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 UBE3DQ7Z6J8 389 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 RANBP3LQ86VV4 465 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PHC2Q8IXK0 858 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PEX5LQ8IYB4 626 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MMP21Q8N119 569 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ACOT4Q8N9L9 421 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 TP53I13Q8NBR0 393 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PLA2G15Q8NCC3 412 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MORN4Q8NDC4 146 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PSD4Q8NDX1 1056 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 OR2L3Q8NG85 312 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 OR52I1Q8NGK6 324 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 OR2A1Q8NGT9 310 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 OR52N1Q8NH53 320 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 NT5CQ8TCD5 201 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ACOT11Q8WXI4 607 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 HTRA1Q92743 480 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 MSLNLQ96KJ4 702 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 LRR1Q96L50 414 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF582Q96NG8 517 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 AGAP4Q96P64 663 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 NELL2Q99435 816 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 C17orf62Q9BQA9 187 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ALOXE3Q9BYJ1 711 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SLC22A4Q9H015 551 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 OSGEPL1Q9H4B0 414 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 IMP3Q9NV31 184 aaKnown RBP8.33□□□□□ -1.08
HDAC3-202ENST00000459727 C14orf105Q9NVL8 296 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 TVP23BQ9NYZ1 205 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PTGFRNQ9P2B2 879 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SLC23A2Q9UGH3 650 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 POLHQ9Y253 713 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 ASB4Q9Y574 426 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SNX11Q9Y5W9 270 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 STON1Q9Y6Q2 735 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 SPACA6W5XKT8 324 aa8.33□□□□□ -1.08
HDAC3-202ENST00000459727 PCM1Q15154 2024 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FEZF1A0PJY2 475 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PRR19A6NJB7 356 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 FAM170BA6NMN3 283 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 M0R3H8 397 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 RGS5O15539 181 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TLX2O43763 284 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 PRKYO43930 277 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 HCN1O60741 890 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 TRIM3O75382 744 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CYP7B1O75881 506 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 AIFM1O95831 613 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 HMGN2P05204 90 aaKnown RBP8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CHRM4P08173 479 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 SLC35G6P0C7Q6 338 aa8.32□□□□□ -1.08
HDAC3-202ENST00000459727 CKMT1AP12532 417 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms