RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 TMEM251Q8N6I4 163 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TEX9Q8N6V9 391 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PDPRQ8NCN5 879 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 BBOF1Q8ND07 529 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MORN4Q8NDC4 146 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SPATA4Q8NEY3 305 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 OR7G3Q8NG95 312 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 HUS1BQ8NHY5 278 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 STAG3L4Q8TBR4 150 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 KCTD4Q8WVF5 259 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CDKL2Q92772 493 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 DAZLQ92904 295 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 WDR34Q96EX3 536 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 C14orf79Q96F83 325 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RBM18Q96H35 190 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SENP5Q96HI0 755 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 JSRP1Q96MG2 331 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 DGAT2Q96PD7 388 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 KCNC2Q96PR1 638 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SMC6Q96SB8 1091 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 DIRC2Q96SL1 478 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ATOH8Q96SQ7 321 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MTERF1Q99551 399 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GPR22Q99680 433 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM173AQ9BQD7 235 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SYT3Q9BQG1 590 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TTYH2Q9BSA4 534 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TBCDQ9BTW9 1192 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 EFCAB11Q9BUY7 163 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MS4A8Q9BY19 250 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 TP63Q9H3D4 680 aaPredicted RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 EHD1Q9H4M9 534 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 LDAHQ9H6V9 325 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 EXO5Q9H790 373 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RPF2Q9H7B2 306 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 CNOT10Q9H9A5 744 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 POPDC3Q9HBV1 291 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PROK2Q9HC23 129 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MCCC2Q9HCC0 563 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 LYRM4Q9HD34 91 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 KCNJ16Q9NPI9 418 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 SACM1LQ9NTJ5 587 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 NSMCE4AQ9NXX6 385 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 GRHL1Q9NZI5 618 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 Q9UFV3 132 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ACAD8Q9UKU7 415 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 MRPS33Q9Y291 106 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 RNF11Q9Y3C5 154 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 ATG4BQ9Y4P1 393 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 C2CD3Q4AC94 2353 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 NAV3Q8IVL0 2385 aa4.32□□□□□ -1.72
GTF3C3-208ENST00000455546 PRR14LQ5THK1 2151 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PDZD2O15018 2839 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TRGV5A0A0B4J1U4 118 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A1B0GVC2 190 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A1W2PR48 441 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 K7EPI3 171 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PLPP1O14494 284 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PGRMC2O15173 223 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PROM1O43490 865 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TMPRSS11DO60235 418 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 DIAPH2O60879 1101 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 EEDO75530 441 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SIX3O95343 332 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 NADKO95544 446 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ACSL3O95573 720 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 C2P06681 752 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 LTA4HP09960 611 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 HIST1H1TP22492 207 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ACVR2AP27037 513 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 GSTM2P28161 218 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 CHRNB4P30926 498 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 BSGP35613 385 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 MC3RP41968 323 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 CASP2P42575 452 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SSR2P43308 183 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 STT3AP46977 705 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ZFP36L2P47974 494 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TRPC1P48995 793 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 MAN2A2P49641 1150 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 RAP1GDS1P52306 607 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 AGFG1P52594 562 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 DLX5P56178 289 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ATP6V0D1P61421 351 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 HERVK_113P63132 956 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ERVK-8P63133 956 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TFF3Q07654 80 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SERTAD2Q14140 314 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 RCN2Q14257 317 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TBCCQ15814 346 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 UAP1Q16222 522 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 MPEG1Q2M385 716 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF791Q3KP31 576 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM35AQ53FP2 167 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SGO1Q5FBB7 561 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PAGE2BQ5JRK9 111 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 CDKL4Q5MAI5 379 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 DEPDC1Q5TB30 811 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms