RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SKIV2L2P42285 1042 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ATP5OP48047 213 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TTPAP49638 278 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ANXA11P50995 505 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 PNLIPRP1P54315 467 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 HADHBP55084 474 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ADARP55265 1226 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 PLGLB1Q02325 96 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ZNF844Q08AG5 666 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CDH17Q12864 832 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 KLF1Q13351 362 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 DYRK1AQ13627 763 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 HERC3Q15034 1050 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TMED2Q15363 201 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SIX1Q15475 284 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ACKR1Q16570 336 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ZNF750Q32MQ0 723 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 KRTAP24-1Q3LI83 254 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CD300EQ496F6 205 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 ACSF3Q4G176 576 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 CCDC38Q502W7 563 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 FASTKD1Q53R41 847 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 CTSL3PQ5NE16 218 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TSTD2Q5T7W7 516 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 NSUN5P2Q63ZY6 315 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 IL20RBQ6UXL0 311 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ASPGQ86U10 573 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 LDB1Q86U70 411 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 SLC26A11Q86WA9 606 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 LRRC6Q86X45 466 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 LACC1Q8IV20 430 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 RCOR2Q8IZ40 523 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ADGRG5Q8IZF4 528 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 LRRC25Q8N386 305 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 PPFIBP2Q8ND30 876 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ZNF740Q8NDX6 193 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PPHLN1Q8NEY8 458 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 TOR1AIP2Q8NFQ8 470 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 OR4K1Q8NGD4 311 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 MBD3L2Q8NHZ7 208 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 NEIL3Q8TAT5 605 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SCARB1Q8WTV0 552 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 KIAA1191Q96A73 305 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 NTNG2Q96CW9 530 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PERPQ96FX8 193 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 VMP1Q96GC9 406 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SMIM10Q96HG1 83 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 MARK4Q96L34 752 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 BIRC8Q96P09 236 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ALS2CR12Q96Q35 445 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PANX2Q96RD6 677 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 RASL10BQ96S79 203 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 FERMT1Q9BQL6 677 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 WDR83Q9BRX9 315 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 LRRC40Q9H9A6 602 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PROK2Q9HC23 129 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 SH2D2AQ9NP31 389 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 NECTIN3Q9NQS3 549 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 PIH1D1Q9NWS0 290 aaKnown RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 HPF1Q9NWY4 346 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 QPCTLQ9NXS2 382 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ALKBH4Q9NXW9 302 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 TUBA8Q9NY65 449 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 MARCH4Q9P2E8 410 aaPredicted RBP3.36□□□□□ -1.87
RBM39-220ENST00000455343 FBXW2Q9UKT8 454 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 INTUQ9ULD6 942 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ERVK-11Q9UQG0 969 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ATG4BQ9Y4P1 393 aa3.36□□□□□ -1.87
RBM39-220ENST00000455343 ATP6AP2A0A1C7CYW4 349 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 LINC00473A8K010 186 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 A8MUA0 341 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 A8MXE2 369 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 G3V3Y1 287 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CD3EAPO15446 510 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 SPOPO43791 374 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CD5LO43866 347 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 TMCC2O75069 709 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ATP6AP2O75787 350 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ZNF189O75820 626 aaPredicted RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 MYO1DO94832 1006 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CATP04040 527 aaKnown RBP3.35□□□□□ -1.87
RBM39-220ENST00000455343 GYPCP04921 128 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CHRM2P08172 466 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 SLC35G6P0C7Q6 338 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 FAM157CP0CG43 387 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CCL3P10147 92 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 TNNT1P13805 278 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 PPP3CBP16298 524 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ALOX12P18054 663 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 MAOAP21397 527 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 CTNNA2P26232 953 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 IMPA1P29218 277 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 PIGAP37287 484 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 GRIA1P42261 906 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 MARCKSL1P49006 195 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 DNASE1L1P49184 302 aa3.35□□□□□ -1.87
RBM39-220ENST00000455343 ZNF81P51508 661 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms