RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PACSIN3Q9UKS6 424 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLLPQ9Y342 182 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NPFFR2Q9Y5X5 522 aa5.44□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FAM159BA6NKW6 160 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EFCAB8A8MWE9 144 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 AHRRA9YTQ3 701 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SHISA8B8ZZ34 492 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 E7ESA3 106 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLOD2O00469 737 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TP53I11O14683 189 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SCO2O43819 266 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ERAL1O75616 437 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPM1BO75688 479 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CBX7O95931 251 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KLK1P06870 262 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CPMP14384 443 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KRT15P19012 456 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LOXP28300 417 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OPRM1P35372 400 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GP5P40197 560 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ALDH9A1P49189 494 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TMED10P49755 219 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LHX2P50458 406 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CLDN18P56856 261 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GPX6P59796 221 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ATP6V0D1P61421 351 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C2orf54Q08AI8 447 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CBLBQ13191 982 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LAPTM5Q13571 262 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 E2F2Q14209 437 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FRG1Q14331 258 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TRADDQ15628 312 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EXOC3L2Q2M3D2 409 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TCHHL1Q5QJ38 904 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C10orf62Q5T681 223 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DEPDC1Q5TB30 811 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NPSR1Q6W5P4 371 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SYDE1Q6ZW31 735 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CXXC5Q7LFL8 322 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GOLGA7Q7Z5G4 137 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BTLAQ7Z6A9 289 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TBC1D1Q86TI0 1168 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ATG4DQ86TL0 474 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ISCA2Q86U28 154 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IFNEQ86WN2 208 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TRIM42Q8IWZ5 723 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC15A4Q8N697 577 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WDSUB1Q8N9V3 476 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SRFBP1Q8NEF9 429 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR52R1Q8NGF1 315 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SMPDL3BQ92485 455 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANKRD7Q92527 254 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FIG4Q92562 907 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TANKQ92844 425 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HGDQ93099 445 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TMBIM1Q969X1 311 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EFHD2Q96C19 240 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NXNL1Q96CM4 212 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KLHL29Q96CT2 875 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LRRC39Q96DD0 335 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TSPAN17Q96FV3 270 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TMEM41AQ96HV5 264 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF845Q96IR2 970 aaPredicted RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PKNOX2Q96KN3 472 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UBXN10Q96LJ8 280 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DACH2Q96NX9 599 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WFIKKN1Q96NZ8 548 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CPNE1Q99829 537 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CENPKQ9BS16 269 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MED18Q9BUE0 208 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR2B2Q9GZK3 357 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FARSBQ9NSD9 589 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LYARQ9NX58 379 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TAS2R10Q9NYW0 307 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MAT2BQ9NZL9 334 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 BCAP29Q9UHQ4 241 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DKKL1Q9UK85 242 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CLEC4AQ9UMR7 237 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EIF3LQ9Y262 564 aaKnown RBP5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANGPTL3Q9Y5C1 460 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCNX3Q9H6A9 2034 aa5.43□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLCE1Q9P212 2302 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ALPK2Q86TB3 2170 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ANKRD33BA6NCL7 494 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SYNDIG1LA6NDD5 238 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC22A20A6NK97 555 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR6C76A6NM76 312 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR7A17O14581 309 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CTIFO43310 598 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ICOSLGO75144 302 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SNX4O95219 450 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLAUP00749 431 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LTA4HP09960 611 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC35E2P0CK97 266 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 S1PR1P21453 382 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PIK3R1P27986 724 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TLX1P31314 330 aaPredicted RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PEX19P40855 299 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PIK3CBP42338 1070 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTH2RP49190 550 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms