RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 KLHL20Q9Y2M5 609 aa17.08■□□□□ 0.32
MECP2-205ENST00000453960 LSM2Q9Y333 95 aaKnown RBP17.08■□□□□ 0.32
MECP2-205ENST00000453960 HS3ST3A1Q9Y663 406 aa17.08■□□□□ 0.32
MECP2-205ENST00000453960 ZW10O43264 779 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 IFI6P09912 130 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 GADD45AP24522 165 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 ALDH4A1P30038 563 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 ACSL1P33121 698 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 GRK5P34947 590 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 FEN1P39748 380 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 RGS6P49758 472 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 LSM3P62310 102 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 RHAGQ02094 409 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 NCF4Q15080 339 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 FAM26EQ8N5C1 309 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 JPH3Q8WXH2 748 aaPredicted RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 RSC1A1Q92681 617 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 ZHX1-C8orf76Q96EF9 292 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 SERINC2Q96SA4 455 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 POLDIP3Q9BY77 421 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 ACTRT3Q9BYD9 372 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 TMEM168Q9H0V1 697 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 DCSTAMPQ9H295 470 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 SRMSQ9H3Y6 488 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 POLMQ9NP87 494 aaPredicted RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 PHF11Q9UIL8 331 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 IFT52Q9Y366 437 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CHST2Q9Y4C5 530 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 KCNE3Q9Y6H6 103 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 ZNF780BQ9Y6R6 833 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 SCN3AQ9NY46 2000 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 METTL15A6NJ78 407 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 H0Y8X5 98 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 MAGEB3O15480 346 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CNOT3O75175 753 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 ENTPD6O75354 484 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 RPLP0P05388 317 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 NDUFV2P19404 249 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 MMP11P24347 488 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 LTBRP36941 435 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 MC3RP41968 323 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 BTN3A2P78410 334 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CDK5Q00535 292 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 TMED1Q13445 227 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 MFSD4BQ5TF39 518 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 FCRL6Q6DN72 434 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 USP43Q70EL4 1123 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 GJD3Q8N144 294 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 OR4K5Q8NGD3 323 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 OR9A2Q8NGT5 310 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 TSACCQ96A04 125 aaPredicted RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 SLC6A18Q96N87 628 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 FNDC11Q9BVV2 318 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 MMP27Q9H306 513 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CD93Q9NPY3 652 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 CCDC59Q9P031 241 aaKnown RBP17.07■□□□□ 0.32
MECP2-205ENST00000453960 CA5BQ9Y2D0 317 aa17.07■□□□□ 0.32
MECP2-205ENST00000453960 FAM221BA6H8Z2 402 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 SCAMP1O15126 338 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 NME6O75414 186 aaPredicted RBP17.06■□□□□ 0.32
MECP2-205ENST00000453960 SLC35G6P0C7Q6 338 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ZNF888P0CJ79 500 aaPredicted RBP17.06■□□□□ 0.32
MECP2-205ENST00000453960 BMP4P12644 408 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ENDOUP21128 410 aaKnown RBP17.06■□□□□ 0.32
MECP2-205ENST00000453960 PRKAR1BP31321 381 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ACTR1BP42025 376 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 TPMTP51580 245 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ACTR1AP61163 376 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 COL19A1Q14993 1142 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ALG11Q2TAA5 492 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ARMCX4Q5H9R4 360 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 CENPSQ8N2Z9 138 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 DIO2Q92813 273 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 NECTIN4Q96NY8 510 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 MROQ9BYG7 248 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 PIAS3Q9Y6X2 628 aa17.06■□□□□ 0.32
MECP2-205ENST00000453960 LRRC72A6NJI9 287 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 DUXAA6NLW8 204 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 CTSVO60911 334 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 PFDN1O60925 122 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 ZIC2O95409 532 aaPredicted RBP17.05■□□□□ 0.32
MECP2-205ENST00000453960 AGR2O95994 175 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 IGFBP1P08833 259 aaPredicted RBP17.05■□□□□ 0.32
MECP2-205ENST00000453960 C8orf89P0DMQ9 161 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 ALPPL2P10696 532 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 UGT2B7P16662 529 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 GSTM3P21266 225 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 SOX18P35713 384 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 BUD31P41223 144 aaPredicted RBP17.05■□□□□ 0.32
MECP2-205ENST00000453960 PRKAG1P54619 331 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
MECP2-205ENST00000453960 SNRPNP63162 240 aaKnown RBP17.05■□□□□ 0.32
MECP2-205ENST00000453960 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.326e-6■□□□□ 11.2
MECP2-205ENST00000453960 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 PRRT3Q5FWE3 981 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 MFSD12Q6NUT3 480 aa17.05■□□□□ 0.32
MECP2-205ENST00000453960 CDC73Q6P1J9 531 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms