RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 EEDO75530 441 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 PRKRAO75569 313 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 CPMP14384 443 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 ZNF708P17019 499 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 SRD5A2P31213 254 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 SOX18P35713 384 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 CPOXP36551 454 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 KBTBD12Q3ZCT8 623 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 MILR1Q7Z6M3 343 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 TBC1D1Q86TI0 1168 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 GAS2L3Q86XJ1 694 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 TRIM42Q8IWZ5 723 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 VWA5B2Q8N398 1253 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 RHEBL1Q8TAI7 183 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 SLC44A1Q8WWI5 657 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 HGDQ93099 445 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 LCORQ96JN0 433 aaPredicted RBP12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 ATOH8Q96SQ7 321 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 SERPINI1Q99574 410 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 MED18Q9BUE0 208 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 NXF5Q9H1B4 397 aaKnown RBP12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 ALG9Q9H6U8 611 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 TAS2R10Q9NYW0 307 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 ATRQ13535 2644 aa12.97□□□□□ -0.33
LYSMD3-202ENST00000453259 PRAMEF25A6NGN4 478 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 SUPT3HB4E1H0 165 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 INAFM1C9JVW0 142 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PLOD2O00469 737 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 TO15178 435 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 EIF3HO15372 352 aaKnown RBP eCLIP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 SUPT3HO75486 399 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 ATP1B1P05026 303 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 GSTA2P09210 222 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 CRABP2P29373 138 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 SPRP35270 261 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 LHX2P50458 406 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 EEFSECP57772 596 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 OCRLQ01968 901 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PLCXD2Q0VAA5 305 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 FASTKD3Q14CZ7 662 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PAGE2Q7Z2X7 111 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 MYLK4Q86YV6 388 aaPredicted RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PLCZ1Q86YW0 608 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 GCNT2Q8N0V5 402 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PYROXD1Q8WU10 500 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 EXT2Q93063 718 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 SERHLQ9NQF3 203 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 AHSPQ9NZD4 102 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 PRODH2Q9UF12 536 aa12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.33
LYSMD3-202ENST00000453259 STAB1Q9NY15 2570 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 OR6C70A6NIJ9 312 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 LINC01387J3KSC0 135 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 TP73O15350 636 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CNOT4O95628 575 aaKnown RBP12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 LTA4HP09960 611 aaKnown RBP12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CT62P0C5K7 136 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CD8BP10966 210 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 PPP3CBP16298 524 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 S1PR1P21453 382 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 DRD5P21918 477 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 UGT2B10P36537 528 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 PTGDSP41222 190 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 XKP51811 444 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CLDN18P56856 261 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 GRTP1Q5TC63 336 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CHMP1BQ7LBR1 199 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 TEX9Q8N6V9 391 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 WDSUB1Q8N9V3 476 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 PPP1R14CQ8TAE6 165 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 WDR20Q8TBZ3 569 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 TRPC4APQ8TEL6 797 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 OMA1Q96E52 524 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 PIK3IP1Q96FE7 263 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 PERPQ96FX8 193 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 WFIKKN1Q96NZ8 548 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 SMYD2Q9NRG4 433 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 C6orf203Q9P0P8 240 aaPredicted RBP12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 MAPRE3Q9UPY8 281 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 ACOT9Q9Y305 439 aa12.95□□□□□ -0.34
LYSMD3-202ENST00000453259 ZANQ9Y493 2812 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 TCRBV9S1A1TA0A576 114 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 C1orf226A1L170 272 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 FRG2CA6NGY1 282 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 LRRC14BA6NHZ5 514 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SLC22A20A6NK97 555 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 FAM159BA6NKW6 160 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 C16orf97H3BN30 126 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 CCDC188H7C350 402 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 UBXN8O00124 270 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SMAD7O15105 426 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms