RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 NCBP2P52298 156 aaKnown RBP eCLIP10.69□□□□□ -0.72e-9■■□□□ 13
SYVN1-204ENST00000449943 LBX1P52954 281 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 ZNF750Q32MQ0 723 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 GPAT3Q53EU6 434 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 LCTLQ6UWM7 567 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 GALNT12Q8IXK2 581 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 HDDC3Q8N4P3 179 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 OR6T1Q8NGN1 323 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 OR2L2Q8NH16 312 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 ZNF582Q96NG8 517 aaPredicted RBP10.69□□□□□ -0.7
SYVN1-204ENST00000449943 PLA2G12AQ9BZM1 189 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 OR2B2Q9GZK3 357 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 PCBD2Q9H0N5 130 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 EQTNQ9NQ60 294 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 PLSCR3Q9NRY6 295 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 PCDHGB2Q9Y5G2 931 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 COLEC10Q9Y6Z7 277 aa10.69□□□□□ -0.7
SYVN1-204ENST00000449943 MAP1BP46821 2468 aaKnown RBP10.69□□□□□ -0.7
SYVN1-204ENST00000449943 NDUFS4O43181 175 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 MOSPD3O75425 235 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 C8orf89P0DMQ9 161 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 HPGDP15428 266 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SSR2P43308 183 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 FBXW4P57775 412 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 CD83Q01151 205 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 LASP1Q14847 261 aaKnown RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 NUDT13Q86X67 352 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SRFBP1Q8NEF9 429 aaKnown RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SETD7Q8WTS6 366 aaKnown RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 RNFT2Q96EX2 444 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 C11orf54Q9H0W9 315 aaPredicted RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 PAQR5Q9NXK6 330 aaPredicted RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 FBXW2Q9UKT8 454 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GRIP1Q9Y3R0 1128 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 PLXNA2O75051 1894 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 NR2F6P10588 404 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SMIM11AP58511 58 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 HOXC5Q00444 222 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 DHCR24Q15392 516 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GPR19Q15760 415 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 ZNF77Q15935 545 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 TMEM201Q5SNT2 666 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SETD6Q8TBK2 473 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SLC25A46Q96AG3 418 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SLC22A4Q9H015 551 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 MIXL1Q9H2W2 232 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 XKR8Q9H6D3 395 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 CNIH4Q9P003 139 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SLC9A8Q9Y2E8 581 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 PLXND1Q9Y4D7 1925 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 ZNF24P17028 368 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GIPRP48546 466 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 ERVFC1P60507 584 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GNA13Q14344 377 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 TCEA2Q15560 299 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GDPGP1Q6ZNW5 385 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 NANOGNBQ7Z5D8 188 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 LHFPL3Q86UP9 236 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 DCUN1D3Q8IWE4 304 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 RERGQ96A58 199 aaPredicted RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 ST6GAL2Q96JF0 529 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 KCTD7Q96MP8 289 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 FYTTD1Q96QD9 318 aaKnown RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 OR52A5Q9H2C5 316 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 EPHX3Q9H6B9 360 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 COL4A6Q14031 1691 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 LATO43561 262 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 TP53P04637 393 aaPredicted RBP10.68□□□□□ -0.7
SYVN1-204ENST00000449943 MSL3P1P0C860 447 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 CD79BP40259 229 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 CCR8P51685 355 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 DDI2Q5TDH0 399 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 GLCCI1Q86VQ1 547 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 KLK6Q92876 244 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 DPH7Q9BTV6 452 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 SPATA5L1Q9BVQ7 753 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 ANKRA2Q9H9E1 313 aa10.68□□□□□ -0.7
SYVN1-204ENST00000449943 CASKO14936 926 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 SEC13P55735 322 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 ILF3Q12906 894 aaKnown RBP eCLIP10.67□□□□□ -0.73e-14■■□□□ 12.7
SYVN1-204ENST00000449943 FLYWCH1Q4VC44 716 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 PDZD3Q86UT5 571 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 SFTPA1Q8IWL2 248 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 TEX47Q8TBZ9 253 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 TMEM246Q9BRR3 403 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 TMED9Q9BVK6 235 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 GLIPR2Q9H4G4 154 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 SFXN1Q9H9B4 322 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 TBC1D17Q9HA65 648 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 IL20RAQ9UHF4 553 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 DIMT1Q9UNQ2 313 aaKnown RBP10.67□□□□□ -0.7
SYVN1-204ENST00000449943 ALPK3Q96L96 1907 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 CKAP5Q14008 2032 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 SLC31A1O15431 190 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 NCR1O76036 304 aa10.67□□□□□ -0.7
SYVN1-204ENST00000449943 CSF3P09919 207 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms