RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 C6orf163Q5TEZ5 329 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 PLAG1Q6DJT9 500 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 MFSD12Q6NUT3 480 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 ARPINQ7Z6K5 226 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 RNF130Q86XS8 419 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 ZSCAN1Q8NBB4 408 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 ELP5Q8TE02 316 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 KCNE4Q8WWG9 221 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 NCLNQ969V3 563 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 C16orf58Q96GQ5 468 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 IP6K3Q96PC2 410 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 SH3GL1Q99961 368 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 SPAG4Q9NPE6 437 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 DTX4Q9Y2E6 619 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 LAMA5O15230 3695 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 COQ9O75208 318 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 HPP00738 406 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 SLC7A2P52569 658 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 PRKAG1P54619 331 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 MXRA7P84157 204 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 FADDQ13158 208 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 CALHM3Q86XJ0 350 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 RAB43Q86YS6 212 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 C9orf40Q8IXQ3 194 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 PNPT1Q8TCS8 783 aaKnown RBP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 ZNF583Q96ND8 569 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 LMF2Q9BU23 707 aaKnown RBP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 CCDC86Q9H6F5 360 aaKnown RBP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 GIN1Q9NXP7 522 aa14.04□□□□□ -0.16
CCNE1-203ENST00000444983 HEMK1Q9Y5R4 338 aaPredicted RBP14.04□□□□□ -0.16
CCNE1-203ENST00000444983 IGF2RP11717 2491 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 MED19A0JLT2 244 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 EVPLLA8MZ36 301 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 GYG2O15488 501 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 GSC2O15499 205 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 TNFRSF21O75509 655 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CHI3L1P36222 383 aaPredicted RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 EIF2S3P41091 472 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 RPS26P62854 115 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 PSG6Q00889 435 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 Q0VFX4 171 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 LASP1Q14847 261 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 MYBPC3Q14896 1274 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 EBPQ15125 230 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 ADRM1Q16186 407 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 EXT1Q16394 746 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CDC73Q6P1J9 531 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 RNF111Q6ZNA4 994 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 SERPINA11Q86U17 422 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CDRT4Q8N9R6 151 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 SLC16A11Q8NCK7 471 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 OR8K3Q8NH51 312 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 M1APQ8TC57 530 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 ADIPOR1Q96A54 375 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 VMP1Q96GC9 406 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CDRT15Q96T59 188 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CADM1Q9BY67 442 aaKnown RBP14.03□□□□□ -0.16
CCNE1-203ENST00000444983 ACTRT3Q9BYD9 372 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 FOLH1BQ9HBA9 442 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 MMP25Q9NPA2 562 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 COPS7AQ9UBW8 275 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CD300AQ9UGN4 299 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 BCAP29Q9UHQ4 241 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 FBXL4Q9UKA2 621 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CORO2BQ9UQ03 480 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 CFAP47Q6ZTR5 3102 aa14.03□□□□□ -0.16
CCNE1-203ENST00000444983 NSG1A0A0A6YYJ2 146 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 PRORSD1PA6NEY8 169 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 TMEM200CA6NKL6 621 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 OR6C76A6NM76 312 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 HMGN4O00479 90 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 NKX2-8O15522 239 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 ASNA1O43681 348 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 CT45A8P0DMV1 189 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 CT45A9P0DMV2 189 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 MATN1P21941 496 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 CASP9P55211 416 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 RNF4P78317 190 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 TXNL4AP83876 142 aaKnown RBP14.02□□□□□ -0.16
CCNE1-203ENST00000444983 ATP1A4Q13733 1029 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 DNAL1Q4LDG9 190 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 CT45A2Q5DJT8 189 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 PIGGQ5H8A4 983 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 PGM2L1Q6PCE3 622 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 ERMP1Q7Z2K6 904 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 NET1Q7Z628 596 aaPredicted RBP14.02□□□□□ -0.16
CCNE1-203ENST00000444983 LGI4Q8N135 537 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 ARHGAP24Q8N264 748 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 HORMAD2Q8N7B1 307 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 NAF1Q96HR8 494 aaKnown RBP14.02□□□□□ -0.16
CCNE1-203ENST00000444983 VPS50Q96JG6 964 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 SLC35G5Q96KT7 338 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 BTBD9Q96Q07 612 aa14.02□□□□□ -0.16
CCNE1-203ENST00000444983 CCNL2Q96S94 520 aaPredicted RBP14.02□□□□□ -0.16
CCNE1-203ENST00000444983 RAD21L1Q9H4I0 556 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms