RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 OR7D2Q96RA2 312 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 TBX5Q99593 518 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 H2AFJQ9BTM1 129 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 IKZF4Q9H2S9 585 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 MIXL1Q9H2W2 232 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 ASB7Q9H672 318 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 COA4Q9NYJ1 87 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 SEC14L3Q9UDX4 400 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 PCDHB1Q9Y5F3 818 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 CNTNAP2Q9UHC6 1331 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 SLC16A4O15374 487 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 USP17L7P0C7H9 530 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 HTRA3P83110 453 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 HSF1Q00613 529 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 ARHGAP1Q07960 439 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 SLAQ13239 276 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 SEMA5AQ13591 1074 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 ADPRMQ3LIE5 342 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 ARMC12Q5T9G4 340 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 NXNL2Q5VZ03 156 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 LINGO4Q6UY18 593 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 TMPPEQ6ZT21 453 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 TMEM145Q8NBT3 493 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 SUN3Q8TAQ9 357 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 RXFP4Q8TDU9 374 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 C15orf40Q8WUR7 153 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 DYNLL2Q96FJ2 89 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 PACRGQ96M98 296 aaPredicted RBP5.34□□□□□ -1.55
PTPRC-209ENST00000442510 MGLLQ99685 303 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 NXF3Q9H4D5 531 aaKnown RBP5.34□□□□□ -1.55
PTPRC-209ENST00000442510 FN3KRPQ9HA64 309 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 TCFL5Q9UL49 500 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 MOKQ9UQ07 419 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 PCDHA8Q9Y5H6 950 aa5.34□□□□□ -1.55
PTPRC-209ENST00000442510 ABHD14A-ACY1A0A1B0GW23 586 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 TCAF2A6NFQ2 919 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 FAM74A7A6NL05 159 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 RAB29O14966 203 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 HRO43593 1189 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 ENTPD6O75354 484 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 CPNE6O95741 557 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 BMP3P12645 472 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF26P17031 533 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-209ENST00000442510 DRD5P21918 477 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 PIGPP57054 158 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.56
PTPRC-209ENST00000442510 NFATC2Q13469 925 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 HTR4Q13639 388 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 TMEM183BQ1AE95 376 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 FAM74A3Q4VXF1 159 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 C18orf63Q68DL7 685 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 PADI6Q6TGC4 694 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 NDUFAF7Q7L592 441 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 FAM220AQ7Z4H9 259 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 KIAA0907Q7Z7F0 614 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF546Q86UE3 836 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 LRRC28Q86X40 367 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-209ENST00000442510 BPIFB2Q8N4F0 458 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 CREB3L4Q8TEY5 395 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 EDEM1Q92611 657 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 MR1Q95460 341 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 R3HDM4Q96D70 268 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF599Q96NL3 588 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 OR1F2PQ96R84 312 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 OR8B4Q96RC9 309 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 CMKLR1Q99788 373 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 CST11Q9H112 138 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 TBC1D17Q9HA65 648 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 MYNNQ9NPC7 610 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 MKKSQ9NPJ1 570 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-209ENST00000442510 MIEF1Q9NQG6 463 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 PXMP2Q9NR77 195 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 PCDHA10Q9Y5I2 948 aa5.34□□□□□ -1.56
PTPRC-209ENST00000442510 A0A1B0GVC2 190 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 TCRBV9S1A1TA0A576 114 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 FAM170BA6NMN3 283 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 RDH16O75452 317 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 CBR3O75828 277 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 PCDH8O95206 1070 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 JUNP05412 331 aaKnown RBP5.33□□□□□ -1.56
PTPRC-209ENST00000442510 MMP7P09237 267 aaPredicted RBP5.33□□□□□ -1.56
PTPRC-209ENST00000442510 CD3GP09693 182 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 MPSTP25325 297 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 MGAT1P26572 445 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 VIPR1P32241 457 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF84P51523 738 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 CD47Q08722 323 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 NPRL3Q12980 569 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 PPIGQ13427 754 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRC-209ENST00000442510 GPR50Q13585 617 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 ZRANB3Q5FWF4 1079 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 LIPMQ5VYY2 423 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 ZNF730Q6ZMV8 503 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 GDPGP1Q6ZNW5 385 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 TMUB2Q71RG4 321 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 KIAA0319LQ8IZA0 1049 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 PRR18Q8N4B5 295 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 FRZBQ92765 325 aa5.33□□□□□ -1.56
PTPRC-209ENST00000442510 KIF12Q96FN5 646 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms