RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PLEKHH3Q7Z736 793 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 NXPE1Q8N323 547 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 RFT1Q96AA3 541 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 COQ10AQ96MF6 247 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 THAP7Q9BT49 309 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 PDFQ9HBH1 243 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 NDUFB11Q9NX14 153 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 COPZ2Q9P299 210 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 GCM2O75603 506 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 G0S2P27469 103 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 MANFP55145 182 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 AANATQ16613 207 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 MPPE1Q53F39 396 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 IZUMO1Q8IYV9 350 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 OR52N1Q8NH53 320 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 HUS1BQ8NHY5 278 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 BTN2A2Q8WVV5 523 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 AP2M1Q96CW1 435 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SUSD3Q96L08 255 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 OR6C2Q9NZP2 312 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 GULP1Q9UBP9 304 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SRRDQ9UH36 339 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 RD3LP0DJH9 198 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ALPPL2P10696 532 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 RHCEP18577 417 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 NSG1P42857 185 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ASMTP46597 345 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 STK19P49842 368 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ARF5P84085 180 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 GPR26Q8NDV2 337 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 OR52H1Q8NGJ2 320 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 CLP1Q92989 425 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 EXOSC8Q96B26 276 aaKnown RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 TADA1Q96BN2 335 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 C19orf43Q9BQ61 176 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 OR51J1Q9H342 316 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 KCNK12Q9HB15 430 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 CUEDC1Q9NWM3 386 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 MBD1Q9UIS9 605 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 ATXN7L1Q9ULK2 861 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-209ENST00000439886 MGAT4BQ9UQ53 548 aa11.08□□□□□ -0.64
SMPD4-209ENST00000439886 SSC5DA1L4H1 1573 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 IGLV3-10A0A075B6K4 115 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 PROM1O43490 865 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 LANCL1O43813 399 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 OAZ2O95190 189 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 APOC3P02656 99 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 RAF1P04049 648 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 IDSP22304 550 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 CLDN20P56880 219 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TNK1Q13470 666 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 CCSMST1Q4G0I0 132 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ACSM5Q6NUN0 579 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 SMARCD3Q6STE5 483 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ARL9Q6T311 187 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 WASH2PQ6VEQ5 465 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 C17orf107Q6ZR85 190 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.641e-11■■■■■ 41.1
SMPD4-209ENST00000439886 SCAMP4Q969E2 229 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TAPBPLQ9BX59 468 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 CACNG6Q9BXT2 260 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TTYH1Q9H313 450 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 EGLN3Q9H6Z9 239 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF275Q9NSD4 429 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HECAQ9UBI9 543 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 PDCD11Q14690 1871 aaKnown RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 RTCAO00442 366 aaKnown RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 MID1O15344 667 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HOXA2O43364 376 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 SCN2BO60939 215 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 SLC43A1O75387 559 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 EPHX1P07099 455 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 NR2F1P10589 423 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ELK1P19419 428 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 LIM2P55344 173 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 MAZP56270 477 aaKnown RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 RAET1GQ6H3X3 334 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 OR8K5Q8NH50 307 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 TMEM43Q9BTV4 400 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 FOLH1BQ9HBA9 442 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 MAB21L2Q9Y586 359 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HEPACAM2A8MVW5 462 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 DVL2O14641 736 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 FRS3O43559 492 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 RGS11O94810 467 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 STATHP02808 62 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HPGDP15428 266 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 NUP62P37198 522 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HOXA1P49639 335 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 PURAQ00577 322 aaKnown RBP11.07□□□□□ -0.64
SMPD4-209ENST00000439886 DEFA5Q01523 94 aa11.07□□□□□ -0.64
SMPD4-209ENST00000439886 HSF2Q03933 536 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms