RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 OR52J3Q8NH60 311 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 DTNBP1Q96EV8 351 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 ACTRT3Q9BYD9 372 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 USE1Q9NZ43 259 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 PDP1Q9P0J1 537 aaPredicted RBP19.77■□□□□ 0.75
PTPRF-207ENST00000436724 NTMQ9P121 344 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 IFT80Q9P2H3 777 aaPredicted RBP19.77■□□□□ 0.75
PTPRF-207ENST00000436724 SEC14L3Q9UDX4 400 aa19.77■□□□□ 0.75
PTPRF-207ENST00000436724 TMEM150CB9EJG8 249 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 TGFBR3LH3BV60 316 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 AGRPO00253 132 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 SIGLEC6O43699 453 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 MITFO75030 526 aaPredicted RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 NSA2O95478 260 aaKnown RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 FPR1P21462 350 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ARL4DP49703 201 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 LPAL2Q16609 132 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ZBED5Q49AG3 693 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 MFSD12Q6NUT3 480 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 TMPRSS9Q7Z410 1059 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 COMTD1Q86VU5 262 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 APOBEC4Q8WW27 367 aaKnown RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 SLC9A6Q92581 669 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 SLC35A4Q96G79 324 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 MS4A4EQ96PG1 132 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ZNF607Q96SK3 696 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ADAP2Q9NPF8 381 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ATXN7L1Q9ULK2 861 aaPredicted RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 GPC6Q9Y625 555 aaPredicted RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 MAU2Q9Y6X3 613 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 LY6G6EA0A0G2JKS1 128 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 PDE9AO76083 593 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 CDK4P11802 303 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 POLR2IP36954 125 aaKnown RBP19.76■□□□□ 0.75
PTPRF-207ENST00000436724 PIGAP37287 484 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ARHGDIAP52565 204 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 SLC13A2Q13183 592 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 TCTE1Q5JU00 501 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 FHL5Q5TD97 284 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 GALNT5Q7Z7M9 940 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 OR4C6Q8NH72 309 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 RNF31Q96EP0 1072 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 MBOAT4Q96T53 435 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 CHRNA10Q9GZZ6 450 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 THSD1Q9NS62 852 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 ZNF451Q9Y4E5 1061 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 U3KQA8 63 aa19.76■□□□□ 0.75
PTPRF-207ENST00000436724 H3BMH7 237 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 PCDHGA12O60330 932 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 OR2B3O76000 313 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 RNH1P13489 461 aaKnown RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 FOLR1P15328 257 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 ANXA11P50995 505 aaKnown RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 DAPP51397 102 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 GANABQ14697 944 aaKnown RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 EXOSC7Q15024 291 aaKnown RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 PRICKLE4Q2TBC4 344 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 PERM1Q5SV97 790 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 GPR141Q7Z602 305 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 RBM45Q8IUH3 476 aaKnown RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 DTWD2Q8NBA8 298 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 ADAMTS15Q8TE58 950 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 ZG16BQ96DA0 208 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 MAT2BQ9NZL9 334 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 PTGFRNQ9P2B2 879 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 RHCGQ9UBD6 479 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 LYVE1Q9Y5Y7 322 aa19.75■□□□□ 0.75
PTPRF-207ENST00000436724 MN1Q10571 1320 aaPredicted RBP19.75■□□□□ 0.75
PTPRF-207ENST00000436724 JRKO75564 520 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 KCNJ5P48544 419 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 CDH12P55289 794 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 BTG2P78543 158 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 SPIBQ01892 262 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 MGAT2Q10469 447 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 TTLL10Q6ZVT0 673 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 OR4D11Q8NGI4 311 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 CDS1Q92903 461 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 ZC3H10Q96K80 434 aaKnown RBP19.74■□□□□ 0.75
PTPRF-207ENST00000436724 DUSP23Q9BVJ7 150 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 TIMMDC1Q9NPL8 285 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 HEMK1Q9Y5R4 338 aaPredicted RBP19.74■□□□□ 0.75
PTPRF-207ENST00000436724 SEC16AO15027 2179 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 FITM1A5D6W6 292 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 SEMA7AO75326 666 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 SERPINB7O75635 380 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 XCR1P46094 333 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 IL1RL1Q01638 556 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 KCNAB2Q13303 367 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 GRM7Q14831 915 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 GARNL3Q5VVW2 1013 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 OR1L3Q8NH93 324 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 VANGL1Q8TAA9 524 aaPredicted RBP19.74■□□□□ 0.75
PTPRF-207ENST00000436724 PROX1Q92786 737 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 MUS81Q96NY9 551 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 EXD2Q9NVH0 621 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 ETAA1Q9NY74 926 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 C19orf53Q9UNZ5 99 aaPredicted RBP19.74■□□□□ 0.75
PTPRF-207ENST00000436724 PCDHGB3Q9Y5G1 929 aa19.74■□□□□ 0.75
PTPRF-207ENST00000436724 H0YAE9 185 aa19.73■□□□□ 0.75
PTPRF-207ENST00000436724 FCMRO60667 390 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms