RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZNF354BQ96LW1 612 aa15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 THAP7Q9BT49 309 aaPredicted RBP15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 MIEF1Q9NQG6 463 aa15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 MAN2C1Q9NTJ4 1040 aa15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 ACAD8Q9UKU7 415 aa15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 KCNE2Q9Y6J6 123 aa15.74■□□□□ 0.11
NPC1L1-203ENST00000423141 SNTNA6NMZ2 147 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SH3BP5O60239 455 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SRPRAP08240 638 aaKnown RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CTRB1P17538 263 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 DDCP20711 480 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SLC1A3P43003 542 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CTSCP53634 463 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 BTG1P62324 171 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 TBPL1P62380 186 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SYTL3Q4VX76 610 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CLEC12AQ5QGZ9 265 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 BICRALQ6AI39 1079 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CTRB2Q6GPI1 263 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 ESX1Q8N693 406 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 C7orf57Q8NEG2 295 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 ADAMTS19Q8TE59 1207 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 BCL7CQ8WUZ0 217 aaPredicted RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 PRR14Q9BWN1 585 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SEC14L3Q9UDX4 400 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SCML1Q9UN30 329 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 ITM2BQ9Y287 266 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 PRRC2BQ5JSZ5 2229 aaKnown RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 LOC105369274A0A096LPK9 316 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 GSAPA4D1B5 854 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 STOMP27105 288 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 OR1D2P34982 312 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CLCNKAP51800 687 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 ZNF155Q12901 538 aaPredicted RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 LMAN2Q12907 356 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 SNTA1Q13424 505 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 GPR139Q6DWJ6 353 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 MZT2AQ6P582 158 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 USP50Q70EL3 339 aaPredicted RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 KRT74Q7RTS7 529 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 OR4N4Q8N0Y3 316 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 OR8D4Q8NGM9 314 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 CEP76Q8TAP6 659 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 OTULINQ96BN8 352 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 OTUB1Q96FW1 271 aaPredicted RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 ZDHHC6Q9H6R6 413 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 IMP3Q9NV31 184 aaKnown RBP15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 FRMPD3Q5JV73 1810 aa15.73■□□□□ 0.11
NPC1L1-203ENST00000423141 PRAMEF27A3QJZ7 478 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 HMGN4O00479 90 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 EEF1E1O43324 174 aaKnown RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 GREM1O60565 184 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 CFDP00746 253 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 PTBP1P26599 531 aaKnown RBP eCLIP15.72■□□□□ 0.112e-18■■■■■ 69
NPC1L1-203ENST00000423141 PBLDP30039 288 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 CCND3P30281 292 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 MAPK8P45983 427 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 HSPB3Q12988 150 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SYPL1Q16563 259 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 LGALSLQ3ZCW2 172 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 C16orf62Q7Z3J2 963 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 ADGRF3Q8IZF5 1079 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 ZNF480Q8WV37 535 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SCMH1Q96GD3 660 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 TMEM169Q96HH4 297 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SORCS2Q96PQ0 1159 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SUV39H2Q9H5I1 410 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 C11orf49Q9H6J7 331 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 RANBP3Q9H6Z4 567 aaPredicted RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 NT5DC2Q9H857 520 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 A4GALTQ9NPC4 353 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 TAS2R7Q9NYW3 318 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 CH25HO95992 272 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 EIF4EP06730 217 aaKnown RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 ZNF81P51508 661 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 DUSP6Q16828 381 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SLC36A4Q6YBV0 504 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 KCTD20Q7Z5Y7 419 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 RFT1Q96AA3 541 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 NEURL3Q96EH8 262 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 SAP130Q9H0E3 1048 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 ISYNA1Q9NPH2 558 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 ENAMQ9NRM1 1142 aa15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 MRPS18AQ9NVS2 196 aaKnown RBP15.72■□□□□ 0.11
NPC1L1-203ENST00000423141 TSPAN4O14817 238 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 HLA-DPB1P04440 258 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 NPPBP16860 134 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 SMSP52788 366 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 EPHA5P54756 1037 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 DBPQ10586 325 aaPredicted RBP15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 DSG2Q14126 1118 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 KCNA10Q16322 511 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 GPR162Q16538 588 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 NTRK2Q16620 822 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 MINDY4Q4G0A6 757 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 EOGTQ5NDL2 527 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 PLEKHM3Q6ZWE6 761 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 MORN4Q8NDC4 146 aa15.71■□□□□ 0.11
NPC1L1-203ENST00000423141 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms