RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SLC25A28Q96A46 364 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 ZUFSPQ96AP4 578 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 MAELQ96JY0 434 aaKnown RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 SMC6Q96SB8 1091 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 LPAR4Q99677 370 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 BEX2Q9BXY8 128 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 PCDHAC1Q9H158 963 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 OR52A5Q9H2C5 316 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 NDST4Q9H3R1 872 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 CDCP1Q9H5V8 836 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 ASB8Q9H765 288 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 MMP25Q9NPA2 562 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 SMOXQ9NWM0 555 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 HACD3Q9P035 362 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 CRLS1Q9UJA2 301 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 MAN1B1Q9UKM7 699 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 NDRG4Q9ULP0 352 aaKnown RBP4.48□□□□□ -1.69
SFXN1-202ENST00000421887 ATP6V1DQ9Y5K8 247 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 DYSFO75923 2080 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 VPS13CQ709C8 3753 aa4.48□□□□□ -1.69
SFXN1-202ENST00000421887 EML6Q6ZMW3 1958 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 LOC102723971A0A1B0GUV8 181 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 KCNK1O00180 336 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 STX7O15400 261 aaKnown RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 MFSD11O43934 449 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 VPS26AO75436 327 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 RPN2P04844 631 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 MMP2P08253 660 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 CYC1P08574 325 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PTPN3P26045 913 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PDHA2P29803 388 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 THBS4P35443 961 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PCK1P35558 622 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 POLR2FP61218 127 aaKnown RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PPIAP62937 165 aaKnown RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 SORDQ00796 357 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 MAMLD1Q13495 774 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 VEZF1Q14119 521 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 SEC23BQ15437 767 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 HYAL4Q2M3T9 481 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 SYTL3Q4VX76 610 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 RIPPLY2Q5TAB7 128 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 LIPNQ5VXI9 398 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 RGS9BPQ6ZS82 235 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 SLC22A16Q86VW1 577 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 MCOLN2Q8IZK6 566 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 RAB42Q8N4Z0 105 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 TMEM156Q8N614 296 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 ZFP62Q8NB50 900 aaPredicted RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 OR5K2Q8NHB8 316 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 FLVCR1-AS1Q8TAF5 88 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 MCOLN3Q8TDD5 553 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 BLOC1S5Q8TDH9 187 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 RERGQ96A58 199 aaPredicted RBP4.47□□□□□ -1.69
SFXN1-202ENST00000421887 ULK4Q96C45 1275 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 FAF2Q96CS3 445 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 TSGA13Q96PP4 275 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 TRIB3Q96RU7 358 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PCDHB18PQ96TA0 734 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 CYTH2Q99418 400 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 COPS8Q99627 209 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 SH3GL2Q99962 352 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 UBTD1Q9HAC8 227 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 XPR1Q9UBH6 696 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 NDRG3Q9UGV2 375 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 AMFRQ9UKV5 643 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 PLAGL1Q9UM63 463 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 FAM215AQ9Y5M1 114 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 ABCA1O95477 2261 aa4.47□□□□□ -1.69
SFXN1-202ENST00000421887 C2orf81A6NN90 581 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 FAM166BA8MTA8 275 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 TMCO5BA8MYB1 307 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 EEF1E1-BLOC1S5C9J1V9 151 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 TXNDC9O14530 226 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 LIN7AO14910 233 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SLC16A5O15375 505 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 EEF1E1O43324 174 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 BUD23O43709 281 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CD5LO43866 347 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SRP72O76094 671 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ACTL6BO94805 426 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 AP2A1O95782 977 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SYF2O95926 243 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CCDC172P0C7W6 258 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 NPPBP16860 134 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 EGR1P18146 543 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CD9P21926 228 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SLC26A3P40879 764 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 PRKCIP41743 596 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SSR1P43307 286 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 HLCSP50747 726 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 PLOD1Q02809 727 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 TNK1Q13470 666 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 NAA25Q14CX7 972 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ACKR1Q16570 336 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 NDUFA9Q16795 377 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms