RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 Q96MF0 132 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 DACH2Q96NX9 599 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 GPR78Q96P69 363 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 PELOQ9BRX2 385 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 ERP44Q9BS26 406 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 BRINP2Q9C0B6 783 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 WDR41Q9HAD4 459 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 KLHL28Q9NXS3 571 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CPSF2Q9P2I0 782 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 BCAP29Q9UHQ4 241 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 ADGRE2Q9UHX3 823 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 FBXL2Q9UKC9 423 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CES1P1Q9UKY3 287 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 SAR1BQ9Y6B6 198 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 IKBKGQ9Y6K9 419 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CUBNO60494 3623 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 A8MXE2 369 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 H0YC42 278 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 PLOD2O00469 737 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ERAL1O75616 437 aaKnown RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 TNFSF13O75888 250 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 SMNDC1O75940 238 aaKnown RBP eCLIP7.35□□□□□ -1.23
VIM-202ENST00000421459 CBX7O95931 251 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 IL18BPO95998 194 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ACTL6AO96019 429 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 HEXAP06865 529 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CPMP14384 443 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CPN1P15169 458 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 PORP16435 677 aaPredicted RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 PCSK2P16519 638 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 KRT15P19012 456 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CRABP2P29373 138 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CPOXP36551 454 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ARL1P40616 181 aaPredicted RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 MAGEA4P43358 317 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 LHX2P50458 406 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ALDH18A1P54886 795 aaKnown RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 PLTPP55058 493 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 TPD52P55327 224 aaPredicted RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 GFRA1P56159 465 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 MRPS35P82673 323 aaKnown RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 PLCXD2Q0VAA5 305 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 RCAN2Q14206 197 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 Q5PR19 223 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CCNYL2Q5T2Q4 361 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ANKRD34AQ69YU3 496 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 VWA1Q6PCB0 445 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ZDHHC24Q6UX98 284 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CYS1Q717R9 158 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ZNF550Q7Z398 422 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ADGRE4PQ86SQ3 457 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 C7orf57Q8NEG2 295 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 OR7G1Q8NGA0 311 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 OR52R1Q8NGF1 315 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 TMBIM1Q969X1 311 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CTHRC1Q96CG8 243 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 PHF21BQ96EK2 531 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 WFIKKN1Q96NZ8 548 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 HS3ST6Q96QI5 342 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 SECISBP2Q96T21 854 aaKnown RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 NAPGQ99747 312 aaPredicted RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 OSBPL11Q9BXB4 747 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 UBTD1Q9HAC8 227 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ZBTB26Q9HCK0 441 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 BEX4Q9NWD9 120 aaPredicted RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 TAS2R10Q9NYW0 307 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 MAT2BQ9NZL9 334 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 KLRF1Q9NZS2 232 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 WHRNQ9P202 907 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 CLCF1Q9UBD9 225 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 HEY2Q9UBP5 337 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 ZNF639Q9UID6 485 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 EXO1Q9UQ84 846 aaKnown RBP7.35□□□□□ -1.23
VIM-202ENST00000421459 ACOT9Q9Y305 439 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 PLLPQ9Y342 182 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 TSC22D4Q9Y3Q8 395 aa7.35□□□□□ -1.23
VIM-202ENST00000421459 A0A1W2PNV4 684 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 PRAMEF25A6NGN4 478 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 SYCE1LA8MT33 242 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 DEFB108AA8MXU0 73 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CCDC188H7C350 402 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 FOXE1O00358 373 aaPredicted RBP7.34□□□□□ -1.23
VIM-202ENST00000421459 CASKO14936 926 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 EIF3HO15372 352 aaKnown RBP eCLIP7.34□□□□□ -1.23
VIM-202ENST00000421459 ZIC3O60481 467 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CBR3O75828 277 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CLDN9O95484 217 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 PAFAH1B1P43034 410 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 TMED10P49755 219 aaKnown RBP7.34□□□□□ -1.23
VIM-202ENST00000421459 EMDP50402 254 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 ARFIP1P53367 373 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CLDN15P56746 228 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CLDN18P56856 261 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 CORO7P57737 925 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 SIRPAP78324 504 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 RPP38P78345 283 aaKnown RBP7.34□□□□□ -1.23
VIM-202ENST00000421459 PHEXP78562 749 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 HMGCS1Q01581 520 aa7.34□□□□□ -1.23
VIM-202ENST00000421459 GALNT1Q10472 559 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms