RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CWH43Q9H720 699 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 BTNL2Q9UIR0 455 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 INTS6Q9UL03 887 aaKnown RBP12.55□□□□□ -0.4
BDNF-208ENST00000418212 STRCP1A6NGW2 1772 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 FAAHO00519 579 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 FOSL2P15408 326 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 HLCSP50747 726 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.55□□□□□ -0.4
BDNF-208ENST00000418212 RNF111Q6ZNA4 994 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 OR2L5Q8NG80 312 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 OR2L2Q8NH16 312 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 HDHD5Q9BXW7 423 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 CD207Q9UJ71 328 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 SGK494L7N484 410 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 HK1P19367 917 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 HNRNPA0Q13151 305 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 WSCD2Q2TBF2 565 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 MFSD6LQ8IWD5 586 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 PIK3R3Q92569 461 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 C1QTNF1Q9BXJ1 281 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 TMEM168Q9H0V1 697 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ACTR10Q9NZ32 417 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 A0A1W2PRG6 482 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 A6NL46 340 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 LCKP06239 509 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 HK3P52790 923 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 NCS1P62166 190 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 MAP4K2Q12851 820 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 NLGN4XQ8N0W4 816 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 INSM2Q96T92 566 aaPredicted RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 GINS4Q9BRT9 223 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 POU2F3Q9UKI9 436 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 AKAP6Q13023 2319 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 TMEM202A6NGA9 273 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 SLC9B1P1A6NJY1 282 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 SMAD9O15198 467 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 LILRB3O75022 631 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ADAM23O75077 832 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ARL6IP5O75915 188 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ATE1O95260 518 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 RAB36O95755 333 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 GMFBP60983 142 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 PRDX1Q06830 199 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 DSG2Q14126 1118 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 GAS6Q14393 721 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 GRM7Q14831 915 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 RUNDC3AQ59EK9 446 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ZNF550Q7Z398 422 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 GALNT7Q86SF2 657 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 UBQLNLQ8IYU4 475 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 IL22RA1Q8N6P7 574 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 OR2T11Q8NH01 316 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 OR4K13Q8NH42 304 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 RBP7Q96R05 134 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 LGR4Q9BXB1 951 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 MOV10Q9HCE1 1003 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 PRSS16Q9NQE7 514 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 NANSQ9NR45 359 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 ZFR2Q9UPR6 939 aaKnown RBP12.54□□□□□ -0.4
BDNF-208ENST00000418212 TMEM5Q9Y2B1 443 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 PHIPQ8WWQ0 1821 aa12.54□□□□□ -0.4
BDNF-208ENST00000418212 SEMA3DO95025 777 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 SERPINA3P01011 423 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 NR4A2P43354 598 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 RABIFP47224 123 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PLGLB1Q02325 96 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 ERV3-1Q14264 604 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 CDKL4Q5MAI5 379 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 BORAQ6PGQ7 559 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PJA1Q8NG27 643 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 GATAD2BQ8WXI9 593 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 MOAP1Q96BY2 351 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 TMEM9Q9P0T7 183 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PCDHGB5Q9Y5G0 923 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 UGDHO60701 494 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 TRIM3O75382 744 aaPredicted RBP12.53□□□□□ -0.4
BDNF-208ENST00000418212 ITGA10O75578 1167 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 SPARCP09486 303 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 GKN3PP0CG01 181 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PIM1P11309 404 aaPredicted RBP12.53□□□□□ -0.4
BDNF-208ENST00000418212 HSD11B1P28845 292 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 CSNK1DP48730 415 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 SELENOWP63302 87 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 PMS2P3Q13401 168 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 SHHQ15465 462 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.53□□□□□ -0.4
BDNF-208ENST00000418212 C22orf42Q6IC83 251 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 NEIL3Q8TAT5 605 aa12.53□□□□□ -0.4
BDNF-208ENST00000418212 NXPE3Q969Y0 559 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms