RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 NRTNQ99748 197 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 TMEM79Q9BSE2 394 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 GTPBP2Q9BX10 602 aaKnown RBP5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 RAB11FIP5Q9BXF6 653 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 XKR8Q9H6D3 395 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 UCK1Q9HA47 277 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 POT1Q9NUX5 634 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 ALKBH4Q9NXW9 302 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 NLGN3Q9NZ94 848 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 PCTPQ9UKL6 214 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 PLAGL1Q9UM63 463 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 ICKQ9UPZ9 632 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 BPTFQ12830 3046 aa5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 TDRD6O60522 2096 aaKnown RBP5.57□□□□□ -1.52
NIFKP3-201ENST00000417799 ARHGEF17Q96PE2 2063 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LNP1A1A4G5 178 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TCP11X1B4DZS4 312 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 K7EPI3 171 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 E2F3O00716 465 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ITM2AO43736 263 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LRP3O75074 770 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SNNO75324 88 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LYPLA1O75608 230 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ARRB2P32121 409 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SHMT2P34897 504 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 CCR10P46092 362 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SLC1A6P48664 564 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 CDH13P55290 713 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ABCE1P61221 599 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TBPL1P62380 186 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 GNGT1P63211 74 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TSTA3Q13630 321 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 GTF2H2Q13888 395 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 RCN2Q14257 317 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 FASTKQ14296 549 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SF3A2Q15428 464 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 RBBP7Q16576 425 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 BAK1Q16611 211 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SH2D4BQ5SQS7 431 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 CES4AQ5XG92 561 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 GTF2H2CQ6P1K8 395 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ZNF782Q6ZMW2 699 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LRRC70Q7Z2Q7 622 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 THOC6Q86W42 341 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 AMIGO1Q86WK6 493 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SLC35F3Q8IY50 421 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LSMEM2Q8N112 164 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 C2orf73Q8N5S3 287 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TEX9Q8N6V9 391 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SNX31Q8N9S9 440 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LMNTD1Q8N9Z9 388 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 LINC01555Q8NAE3 123 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 PPFIBP2Q8ND30 876 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 HMGCLL1Q8TB92 370 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TRPC4APQ8TEL6 797 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SETD7Q8WTS6 366 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 PYCR2Q96C36 320 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 RNF125Q96EQ8 232 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 MED8Q96G25 268 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 OR4K3Q96R72 315 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 TRMOQ9BU70 441 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 PITPNM3Q9BZ71 974 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 C20orf27Q9GZN8 174 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 DRC3Q9H069 523 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 PCBD2Q9H0N5 130 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SRMSQ9H3Y6 488 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SLC32A1Q9H598 525 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 NOL11Q9H8H0 719 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 EML4Q9HC35 981 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SEMA4BQ9NPR2 832 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 CCDC177Q9NQR7 707 aaPredicted RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 DNAJC11Q9NVH1 559 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 OR6C2Q9NZP2 312 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 OPTCQ9UBM4 332 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 SLC22A14Q9Y267 594 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ANGPTL3Q9Y5C1 460 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ZFC3H1O60293 1989 aaKnown RBP5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 PCDH15Q96QU1 1955 aa5.56□□□□□ -1.52
NIFKP3-201ENST00000417799 ANKRD12Q6UB98 2062 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 LY6G6EA0A0G2JKS1 128 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 A0A1W2PPV9 198 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 SLC22A23A1A5C7 686 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 OR6C74A6NCV1 312 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 OR5K3A6NET4 321 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 LILRA5A6NI73 299 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 FAM90A7PA6NKC0 464 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 FAM90A22PA8MWA6 464 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 FAM90A12PA8MX19 464 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 FAM90A23PA8MXZ1 464 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 PROB1E7EW31 1015 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 BTN3A3O00478 584 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 PPP6CO00743 305 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 CDX4O14627 284 aaPredicted RBP5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 NUDT21O43809 227 aaKnown RBP5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 SHOX2O60902 331 aaPredicted RBP5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 HSPA4LO95757 839 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 MLYCDO95822 493 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 OTCP00480 354 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 CHRNGP07510 517 aa5.55□□□□□ -1.52
NIFKP3-201ENST00000417799 VIMP08670 466 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms