RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 EPHA8P29322 1005 aaPredicted RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 OR1D5P58170 312 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 BNC1Q01954 994 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 SHBQ15464 509 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 EXOSC6Q5RKV6 272 aaKnown RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 CDRT4Q8N9R6 151 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 C7orf57Q8NEG2 295 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 OR10G2Q8NGC3 310 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 ADAMTS16Q8TE57 1224 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 HDAC2Q92769 488 aaKnown RBP15.72■□□□□ 0.11
SSBP3-205ENST00000417664 EDAQ92838 391 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 MVB12AQ96EY5 273 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 SLC35A4Q96G79 324 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 DHRS1Q96LJ7 313 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 STACQ99469 402 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 SLC38A1Q9H2H9 487 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 PIGUQ9H490 435 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 DUSP22Q9NRW4 184 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 IRAK4Q9NWZ3 460 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 ACAD8Q9UKU7 415 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 SATB2Q9UPW6 733 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 CACNA1EQ15878 2313 aa15.72■□□□□ 0.11
SSBP3-205ENST00000417664 A0A1B0GTQ1 180 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 FAM227AF5H4B4 570 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 COQ9O75208 318 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ALPPP05187 535 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 CTSBP07858 339 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ATP6V1B1P15313 513 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 HOXD12P35452 270 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ARL4DP49703 201 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 IGLV3-21P80748 117 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-205ENST00000417664 MAP4K2Q12851 820 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 TOP3AQ13472 1001 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-205ENST00000417664 LAPTM4AQ15012 233 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ARHGAP11BQ3KRB8 267 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 PLK5Q496M5 336 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 CYP27C1Q4G0S4 372 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 NKAIN2Q5VXU1 208 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ANKRD34AQ69YU3 496 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 TCTN3Q6NUS6 607 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 MED25Q71SY5 747 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 PRSS42Q7Z5A4 293 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 TSPYL5Q86VY4 417 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-205ENST00000417664 APOL4Q9BPW4 351 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 GABARAPL3Q9BY60 117 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 MTHFD2LQ9H903 347 aaPredicted RBP15.71■□□□□ 0.11
SSBP3-205ENST00000417664 ZNF556Q9HAH1 456 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 CACYBPQ9HB71 228 aaKnown RBP15.71■□□□□ 0.11
SSBP3-205ENST00000417664 MAT2BQ9NZL9 334 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 BLOC1S6Q9UL45 172 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 POFUT2Q9Y2G5 429 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 IFT52Q9Y366 437 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 HCN4Q9Y3Q4 1203 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 CCDC88CQ9P219 2028 aa15.71■□□□□ 0.11
SSBP3-205ENST00000417664 TOX3O15405 576 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 B4GAT1O43505 415 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 CCNB2O95067 398 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 OXSR1O95747 527 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PDGFBP01127 241 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 NELFEP18615 380 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PRKAR1BP31321 381 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 SOX18P35713 384 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ISL1P61371 349 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 NPRL3Q12980 569 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 SQSTM1Q13501 440 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 EXOC3L2Q2M3D2 409 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 TRMT12Q53H54 448 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 RNF220Q5VTB9 566 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PEAR1Q5VY43 1037 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 DHRS4L2Q6PKH6 230 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 KANSL1Q7Z3B3 1105 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 RABEPKQ7Z6M1 372 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 C1orf210Q8IVY1 113 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 TAGAPQ8N103 731 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 D2HGDHQ8N465 521 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 SLC16A11Q8NCK7 471 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 CHDHQ8NE62 594 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 FBLIM1Q8WUP2 373 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ZNF578Q96N58 590 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 FEVQ99581 238 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 RIBC2Q9H4K1 309 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ANKRA2Q9H9E1 313 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 NDRG4Q9ULP0 352 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 PCDHGA8Q9Y5G5 932 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 KCNE3Q9Y6H6 103 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 E9PQ18 207 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 J3KTA2 159 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 OR10H2O60403 315 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 MITFO75030 526 aaPredicted RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ALOX5P09917 674 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 CD1CP29017 333 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 YAP1P46937 504 aaKnown RBP15.7■□□□□ 0.1
SSBP3-205ENST00000417664 HLCSP50747 726 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 HSD17B7P56937 341 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ID2Q02363 134 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 MGAT2Q10469 447 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 AP1ARQ63HQ0 302 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 ISLR2Q6UXK2 745 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 GALNT5Q7Z7M9 940 aa15.7■□□□□ 0.1
SSBP3-205ENST00000417664 LINC00471Q8N535 108 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms