RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 C14orf79Q96F83 325 aa16.37■□□□□ 0.21
CPNE1-210ENST00000416778 LCORQ96JN0 433 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-210ENST00000416778 SLC6A15Q9H2J7 730 aa16.37■□□□□ 0.21
CPNE1-210ENST00000416778 UBQLN3Q9H347 655 aa16.37■□□□□ 0.21
CPNE1-210ENST00000416778 MID1IP1Q9NPA3 183 aa16.37■□□□□ 0.21
CPNE1-210ENST00000416778 NPDC1Q9NQX5 325 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-210ENST00000416778 POLQO75417 2590 aa16.37■□□□□ 0.21
CPNE1-210ENST00000416778 A0A0G2JNJ9 132 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 PCDH7O60245 1069 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 PPM1BO75688 479 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 HPNP05981 417 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 GABRA1P14867 456 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 PCSK2P16519 638 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 CRHR1P34998 444 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 ADH7P40394 386 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 CCT5P48643 541 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 TMED10P49755 219 aaKnown RBP16.36■□□□□ 0.21
CPNE1-210ENST00000416778 NAGLUP54802 743 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 KRTAP10-9P60411 292 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 DCAF7P61962 342 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
CPNE1-210ENST00000416778 BTKQ06187 659 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 ACSM2AQ08AH3 577 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 SPIN4Q56A73 249 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 ZNF628Q5EBL2 1059 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 C1orf185Q5T7R7 199 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 ACSM2BQ68CK6 577 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 TIGD3Q6B0B8 471 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 TMEM81Q6P7N7 255 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 TDRPQ86YL5 185 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 TIMP4Q99727 224 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 ITPAQ9BY32 194 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 B4GALT7Q9UBV7 327 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 Q9UFV3 132 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 GRID1Q9ULK0 1009 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 GPR55Q9Y2T6 319 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-210ENST00000416778 PLLPQ9Y342 182 aa16.36■□□□□ 0.21
CPNE1-210ENST00000416778 GNG14A0A1W2PPG7 69 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 CCDC151A5D8V7 595 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 FAM90A27PA6NNH2 459 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 AHRRA9YTQ3 701 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 TO15178 435 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ACOX3O15254 700 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 PLIN3O60664 434 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 GLRA3O75311 464 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 TRAPPC6AO75865 159 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 MYL2P10916 166 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 GDF1P27539 372 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 SLCO1A2P46721 670 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ZFP36L2P47974 494 aaKnown RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 CDK9P50750 372 aaKnown RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 DNAJB13P59910 316 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 RPP38P78345 283 aaKnown RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 HEPACAMQ14CZ8 416 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 CEBPEQ15744 281 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 PRSS53Q2L4Q9 553 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 SEM1Q6ZVN7 128 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 TRIM46Q7Z4K8 759 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ULK2Q8IYT8 1036 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.35■□□□□ 0.218e-8■■■■■ 32.7
CPNE1-210ENST00000416778 ZNF675Q8TD23 568 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 TMEM41AQ96HV5 264 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ZNF597Q96LX8 424 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 NODALQ96S42 347 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 C12orf65Q9H3J6 166 aaKnown RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 L2HGDHQ9H9P8 463 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 SLC35C2Q9NQQ7 365 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 PRODH2Q9UF12 536 aa16.35■□□□□ 0.21
CPNE1-210ENST00000416778 PHF3Q92576 2039 aaKnown RBP16.35■□□□□ 0.21
CPNE1-210ENST00000416778 ICOSLGO75144 302 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 CDH16O75309 829 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 BCAS2O75934 225 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 ANXA4P09525 319 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 KRT15P19012 456 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 MSX1P28360 303 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 TIA1P31483 386 aaKnown RBP eCLIP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 PTGDSP41222 190 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 NAA20P61599 178 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 NNATQ16517 81 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 CCDC153Q494R4 210 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 VASNQ6EMK4 673 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 SLC30A6Q6NXT4 461 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 DMRTC2Q8IXT2 367 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 SAMD14Q8IZD0 417 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 LIX1Q8N485 282 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 UBLCP1Q8WVY7 318 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 KAT2AQ92830 837 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 EXOSC8Q96B26 276 aaKnown RBP16.34■□□□□ 0.21
CPNE1-210ENST00000416778 ERP27Q96DN0 273 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 OMA1Q96E52 524 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 TNFRSF12AQ9NP84 129 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 OXSMQ9NWU1 459 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 C15orf41Q9Y2V0 281 aa16.34■□□□□ 0.21
CPNE1-210ENST00000416778 C2orf72A6NCS6 295 aa16.33■□□□□ 0.2
CPNE1-210ENST00000416778 UGT2B11O75310 529 aa16.33■□□□□ 0.2
CPNE1-210ENST00000416778 NME6O75414 186 aaPredicted RBP16.33■□□□□ 0.2
CPNE1-210ENST00000416778 EPPINO95925 133 aa16.33■□□□□ 0.2
CPNE1-210ENST00000416778 CT45A8P0DMV1 189 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms