RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FARSAQ9Y285 508 aaKnown RBP13.62□□□□□ -0.23
SGCE-202ENST00000415788 DLGAP4Q9Y2H0 992 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 SPTBN4Q9H254 2564 aa13.62□□□□□ -0.23
SGCE-202ENST00000415788 C1orf226A1L170 272 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 SYNDIG1LA6NDD5 238 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 FXYD1O00168 92 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 CNOT3O75175 753 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 ALOX5P09917 674 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 BCKDHAP12694 445 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 DRD2P14416 443 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 EEFSECP57772 596 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 TAS2R50P59544 299 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 TRIM16LQ309B1 348 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 VWA2Q5GFL6 755 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 NDUFAF5Q5TEU4 345 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 FKBP9P1Q75LS8 142 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 PROSER1Q86XN7 944 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 SCAIQ8N9R8 606 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 OR2Y1Q8NGV0 311 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 FAM110BQ8TC76 370 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 C16orf78Q8WTQ4 265 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 RDH12Q96NR8 316 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 SPSB2Q99619 263 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 MROQ9BYG7 248 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 DPH1Q9BZG8 443 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 WDR12Q9GZL7 423 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 NAA50Q9GZZ1 169 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 RAD21L1Q9H4I0 556 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 NANOGQ9H9S0 305 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 MAPRE3Q9UPY8 281 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 MMACHCQ9Y4U1 282 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 SDK2Q58EX2 2172 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 LOC101059948A0A1B0GTJ6 334 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 A0A1W2PR48 441 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 PCDH17O14917 1159 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 TPST1O60507 370 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 KLF7O75840 302 aaPredicted RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 AIFM1O95831 613 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 ATXN8OSP0DMR3 200 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 MATN1P21941 496 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 PPP2R1BP30154 601 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 HSD17B7P56937 341 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 CLN3Q13286 438 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 QSOX2Q6ZRP7 698 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 OFCC1Q8IZS5 231 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 LIX1Q8N485 282 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.61□□□□□ -0.23
SGCE-202ENST00000415788 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 TMEM125Q96AQ2 219 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 SDR39U1Q9NRG7 319 aaPredicted RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 TEX10Q9NXF1 929 aaPredicted RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 GMPR2Q9P2T1 348 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
SGCE-202ENST00000415788 FAM32AQ9Y421 112 aaKnown RBP13.61□□□□□ -0.23
SGCE-202ENST00000415788 CLDN25C9JDP6 229 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 IL3P08700 152 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 DDCP20711 480 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 CAPN3P20807 821 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 TACR1P25103 407 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 FOLR3P41439 243 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 EPS8Q12929 822 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 OXA1LQ15070 435 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 TGIF1Q15583 401 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 BCL2A1Q16548 175 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 MINDY4Q4G0A6 757 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 S100ZQ8WXG8 99 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 STARD8Q92502 1023 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 NACC2Q96BF6 587 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 CSF3RQ99062 836 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 KCTD14Q9BQ13 255 aaPredicted RBP13.6□□□□□ -0.23
SGCE-202ENST00000415788 BCL7BQ9BQE9 202 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 PSD2Q9BQI7 771 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 ALG2Q9H553 416 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 HMG20AQ9NP66 347 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 LANCL2Q9NS86 450 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
SGCE-202ENST00000415788 PTRH2Q9Y3E5 179 aaKnown RBP13.6□□□□□ -0.23
SGCE-202ENST00000415788 FAM227AF5H4B4 570 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 TLX3O43711 291 aaPredicted RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 PRMT3O60678 531 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 B4GALT2O60909 372 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CTNSO60931 367 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 SNAP29O95721 258 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 CLIC3O95833 236 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 HPRP00739 348 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 NPPAP01160 153 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 IGHEP01854 428 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 G6PDP11413 515 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 EEF1B2P24534 225 aaKnown RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 HTR1EP28566 365 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 RPL3P39023 403 aaKnown RBP13.59□□□□□ -0.23
SGCE-202ENST00000415788 GSK3BP49841 420 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 FOXK2Q01167 660 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 ITGADQ13349 1161 aa13.59□□□□□ -0.23
SGCE-202ENST00000415788 RPS6KA2Q15349 733 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms