RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 KLK4Q9Y5K2 254 aa2.34□□□□□ -2.04
MCF2-204ENST00000414978 OR2M5A3KFT3 312 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 C17orf105B2RV13 164 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 GAPDHSO14556 408 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 TNFRSF13BO14836 293 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 RANBP6O60518 1105 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 OR4F21O95013 312 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 FGFR1OPO95684 399 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 ESRRBO95718 433 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 NR3C1P04150 777 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CLTAP09496 248 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 PTGER4P35408 488 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 HSD17B3P37058 310 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ASCL1P50553 236 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 TUBA4AP68366 448 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 PITX1P78337 314 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 TRIP10Q15642 601 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 LRRC37A5PQ49AS3 106 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SLC25A53Q5H9E4 307 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 DCAF10Q5QP82 559 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 STPG1Q5TH74 334 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 B3GLCTQ6Y288 498 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 LRRC75A-AS1Q8N1F1 130 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 MAB21L3Q8N8X9 362 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CCDC197Q8NCU1 140 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 GGHQ92820 318 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 NTNG2Q96CW9 530 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 NSL1Q96IY1 281 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RBM41Q96IZ5 413 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 GPA33Q99795 319 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZBP1Q9H171 429 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZSCAN16Q9H4T2 348 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 VAT1LQ9HCJ6 419 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 C1orf123Q9NWV4 160 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 FOXJ2Q9P0K8 574 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ONECUT1Q9UBC0 465 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 POMT2Q9UKY4 750 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SPAG17Q6Q759 2223 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CLUHO75153 1309 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 TCHHQ07283 1943 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 FER1L5A0AVI2 2057 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 A0A087X0K7 114 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 A0A1W2PRB8 838 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 GOLGA6L4A6NEF3 574 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SNURFLB1AK76 121 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 K7EQM0 130 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 KLF11O14901 512 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CASKO14936 926 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SNX3O60493 162 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 NPPAP01160 153 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 OPN1LWP04000 364 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RRASP10301 218 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZNF18P17022 549 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SRMP19623 302 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 USP8P40818 1118 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 AVPR1BP47901 424 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CDX1P47902 265 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 ID2Q02363 134 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SRSF5Q13243 272 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 NFATC2Q13469 925 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 DOC2AQ14183 400 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SF3B4Q15427 424 aaKnown RBP eCLIP2.33□□□□□ -2.04
MCF2-204ENST00000414978 TMEM35AQ53FP2 167 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 HECTD2Q5U5R9 776 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ATL3Q6DD88 541 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 SUMO4Q6EEV6 95 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 COLCA1Q6ZS62 124 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 PIWIL4Q7Z3Z4 852 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 KLHDC8AQ8IYD2 350 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 TMEM123Q8N131 208 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ADAD2Q8NCV1 583 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 SUN5Q8TC36 379 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 IGSF21Q96ID5 467 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZNF479Q96JC4 524 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 MTMR9Q96QG7 549 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZNF607Q96SK3 696 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ZMYND12Q9H0C1 365 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RHBGQ9H310 441 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 LY9Q9HBG7 655 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RCC2Q9P258 522 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 MRTO4Q9UKD2 239 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 MGAT4BQ9UQ53 548 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 YIPF1Q9Y548 306 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ASH1LQ9NR48 2969 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 A0A1W2PP11 408 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 MBLAC1A4D2B0 266 aaPredicted RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 A8MUI8 341 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 HHLA1C9JL84 531 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 GPR137BO60478 399 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 CTDNEP1O95476 244 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 UQCRC2P22695 453 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 FCARP24071 287 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 IL10RBQ08334 325 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RBM39Q14498 530 aaKnown RBP2.33□□□□□ -2.04
MCF2-204ENST00000414978 CDSNQ15517 529 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 DECR1Q16698 335 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 ODF4Q2M2E3 257 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 LIPJQ5W064 366 aa2.33□□□□□ -2.04
MCF2-204ENST00000414978 RTL6Q6ICC9 239 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms