RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ABHD18Q0P651 414 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TRIM25Q14258 630 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 CEBPEQ15744 281 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 C3orf38Q5JPI3 329 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 LAPTM4BQ86VI4 370 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 BPHLQ86WA6 291 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PRSS58Q8IYP2 241 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PACRGLQ8N7B6 248 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 OR4K14Q8NGD5 310 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PNPT1Q8TCS8 783 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TMEM125Q96AQ2 219 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ZBED6CLQ96FA7 236 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 CIB1Q99828 191 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 EFHD1Q9BUP0 239 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SPAG4Q9NPE6 437 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 LANCL2Q9NS86 450 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 AKAP7Q9P0M2 348 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PSME2Q9UL46 239 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ENTPD4Q9Y227 616 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SNX13Q9Y5W8 968 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SNX8Q9Y5X2 465 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF780BQ9Y6R6 833 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ZFHX4Q86UP3 3567 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SPTBN4Q9H254 2564 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PRORSD1PA6NEY8 169 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 NOL3O60936 208 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 NPPAP01160 153 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TCN1P20061 433 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 CD247P20963 164 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TRPC1P48995 793 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 CASP9P55211 416 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TRAP1Q12931 704 aaKnown RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SLC13A2Q13183 592 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 NKAIN1Q4KMZ8 207 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 FGD3Q5JSP0 725 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 GPR107Q5VW38 600 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 FAM199XQ6PEV8 388 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ZBTB49Q6ZSB9 765 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SHISA6Q6ZSJ9 500 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 OR9A2Q8NGT5 310 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 GOT1L1Q8NHS2 421 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TANKQ92844 425 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 HOPXQ9BPY8 73 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ULBP3Q9BZM4 244 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 PIF1Q9H611 641 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 ACSS1Q9NUB1 689 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TMEM181Q9P2C4 612 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 USP22Q9UPT9 525 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 SATB2Q9UPW6 733 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 AKAP13Q12802 2813 aa14.54□□□□□ -0.08
SHMT2-202ENST00000414700 TCRBV3S1A0A5B6 114 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 MEN1O00255 615 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 PLD2O14939 933 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CPNE3O75131 537 aaKnown RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 GPR75O95800 540 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 JMJD7P0C870 316 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CEACAM1P13688 526 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CSNK2A2P19784 350 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 PPP2R1BP30154 601 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 NTSP30990 170 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 SOX18P35713 384 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 TARDBPQ13148 414 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 RAB39AQ14964 217 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 RUNDC3AQ59EK9 446 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 HMBOX1Q6NT76 420 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 ZC3H7AQ8IWR0 971 aaKnown RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 SIMC1Q8NDZ2 872 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 SLCO4A1Q96BD0 722 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 PPWD1Q96BP3 646 aaKnown RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 ABCD2Q9UBJ2 740 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 KPNA4O00629 521 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CPMP14384 443 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 SOAT1P35610 550 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 SOX11P35716 441 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 PMS2P3Q13401 168 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 MINDY4Q4G0A6 757 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 DCAF12Q5T6F0 453 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 DGAT2L6Q6ZPD8 337 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 ZNF595Q8IYB9 648 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 LRRC25Q8N386 305 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 OR5P2Q8WZ92 322 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 KAT2AQ92830 837 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CPPED1Q9BRF8 314 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 NECTIN3Q9NQS3 549 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 PRTFDC1Q9NRG1 225 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 GPATCH2Q9NW75 528 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 VPS4AQ9UN37 437 aa14.53□□□□□ -0.08
SHMT2-202ENST00000414700 MRPS33Q9Y291 106 aaKnown RBP14.53□□□□□ -0.08
SHMT2-202ENST00000414700 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 CCDC187A0A096LP49 1063 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 J3QRK9 145 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 CLIC1O00299 241 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 NME6O75414 186 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-202ENST00000414700 BMP2P12643 396 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 MPIP34949 423 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 DCDP81605 110 aaKnown RBP14.52□□□□□ -0.09
SHMT2-202ENST00000414700 MLC1Q15049 377 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 TRIM16LQ309B1 348 aa14.52□□□□□ -0.09
SHMT2-202ENST00000414700 MFSD4BQ5TF39 518 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms