RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CCRL2O00421 344 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KLF11O14901 512 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ARPC5O15511 151 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FLRT2O43155 660 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RGS10O43665 173 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 LIASO43766 372 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 UGT1A9O60656 530 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PRAMEF2O60811 474 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CCDC22O60826 627 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SDC3O75056 442 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF623O75123 536 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PRKRAO75569 313 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR2F2O95006 317 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TJP3O95049 919 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 IL18BPO95998 194 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KNG1P01042 644 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 IFNA10P01566 189 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 EPOP01588 193 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FTH1P02794 183 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RAF1P04049 648 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RPN2P04844 631 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 S100A8P05109 93 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SERPIND1P05546 499 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PROS1P07225 676 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ERCC1P07992 297 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR52Z1P0C646 297 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SPATA31D3P0C874 917 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 UBCP0CG48 685 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DPEP1P16444 411 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FAHP16930 419 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PSMB5P28074 263 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ERP29P30040 261 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 NTSR1P30989 418 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 PCK1P35558 622 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ARR3P36575 388 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MMP12P39900 470 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MAP3K8P41279 467 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MTNR1AP48039 350 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MRPL19P49406 292 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 EPHA5P54756 1037 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SEC61GP60059 68 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RPS7P62081 194 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ERVK-25P63136 954 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 BLOC1S1P78537 153 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SSBP2P81877 361 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CDC42EP1Q00587 391 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DEFA6Q01524 100 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 IFITM2Q01629 132 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MEF2AQ02078 507 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RBPJQ06330 500 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DPTQ07507 201 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DMWDQ09019 674 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CPSF1Q10570 1443 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 STX4Q12846 297 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CTBP1Q13363 440 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 RIN1Q13671 783 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KEAP1Q14145 624 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SELPLGQ14242 412 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ITIH4Q14624 930 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 R3HDM1Q15032 1099 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ARL6IP1Q15041 203 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SLC9A3R2Q15599 337 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 EXT1Q16394 746 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 GSTA3Q16772 222 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ZIK1Q3SY52 487 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 COX19Q49B96 90 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CBWD6Q4V339 395 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TIGD2Q4W5G0 525 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SBK1Q52WX2 424 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CBWD3Q5JTY5 395 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 LGSNQ5TDP6 509 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR2G6Q5TZ20 316 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FAM46CQ5VWP2 391 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 KRT39Q6A163 491 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DOK6Q6PKX4 331 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 C17orf99Q6UX52 265 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 BTNL3Q6UXE8 466 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF562Q6V9R5 426 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 GLDNQ6ZMI3 551 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 C3P1Q6ZMU1 363 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 C17orf107Q6ZR85 190 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SPATA31D4Q6ZUB0 917 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM26Q6ZUK4 368 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SLC16A14Q7RTX9 510 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MRPL21Q7Z2W9 205 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TIPARPQ7Z3E1 657 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 C16orf62Q7Z3J2 963 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 LYG2Q86SG7 212 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FAM90A1Q86YD7 464 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF34Q8IZ26 560 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 HS3ST5Q8IZT8 346 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM156Q8N614 296 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 CADM4Q8NFZ8 388 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 OR5T2Q8NGG2 359 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 TRMT10AQ8TBZ6 339 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 MARCH1Q8TCQ1 289 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 SCARB1Q8WTV0 552 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 UFD1Q92890 307 aa3.4□□□□□ -1.87
SF3B1-203ENST00000414174 DAZLQ92904 295 aaKnown RBP3.4□□□□□ -1.87
SF3B1-203ENST00000414174 FAM46BQ96A09 425 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms