RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ABTB1Q969K4 478 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC22A18Q96BI1 424 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 C14orf79Q96F83 325 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZBED6CLQ96FA7 236 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 AURKBQ96GD4 344 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM101Q96IK0 257 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 MOGAT1Q96PD6 335 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 RIT2Q99578 217 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBX5Q99593 518 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC6A7Q99884 636 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 LBHD1Q9BQE6 289 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 AGMATQ9BSE5 352 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CINPQ9BW66 212 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC19A3Q9BZV2 496 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NYXQ9GZU5 481 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYP4F30PQ9H0H9 118 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLSTN2Q9H4D0 955 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPP1R3EQ9H7J1 279 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 METTL7AQ9H8H3 244 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC38A10Q9HBR0 1119 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLCO1B3Q9NPD5 702 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ISYNA1Q9NPH2 558 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRSS16Q9NQE7 514 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 XPNPEP1Q9NQW7 623 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC39A9Q9NUM3 307 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 H2AFY2Q9P0M6 372 aaPredicted RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PARP2Q9UGN5 583 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 APOBEC3BQ9UH17 382 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 DPP7Q9UHL4 492 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 POLG2Q9UHN1 485 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 SCOCQ9UIL1 159 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF222Q9UK12 451 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PADI1Q9ULC6 663 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TBX20Q9UMR3 447 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TP53TG5Q9Y2B4 290 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 STK38LQ9Y2H1 464 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRPS17Q9Y2R5 130 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 INSRP06213 1382 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLEKHG1Q9ULL1 1385 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 COL18A1P39060 1754 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 TNS1Q9HBL0 1735 aaKnown RBP-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 NCOA1Q15788 1441 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 UBN2Q6ZU65 1347 aa-1.91□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGLV8-61A0A075B6I0 122 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 A0A0J9YX75 114 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCDC194A0A1B0GVG4 234 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ODAMA1E959 279 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C9orf92A6NGG3 77 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TTC34A8MYJ7 566 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CLDN25C9JDP6 229 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FNDC10F2Z333 226 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 BUB1B-PAK6H3BSN5 160 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLK4O00444 970 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRYO14603 147 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TIMM23O14925 209 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 POLR1CO15160 346 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 AQP8O94778 261 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CXCL14O95715 111 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 MT-CO2P00403 227 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARG1P05089 322 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PCCBP05166 539 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 REG1AP05451 166 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 GJB1P08034 283 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C6orf222P0C671 652 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC35G4P0C7Q5 338 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PRKAR1AP10644 381 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCL4P13236 92 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PDIA4P13667 645 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZKSCAN1P17029 563 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FGFR2P21802 821 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 NFYAP23511 347 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HLA-FP30511 346 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPARGP37231 505 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CEACAM6P40199 344 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TSPAN7P41732 249 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACAA2P42765 397 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CA7P43166 264 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAGEA9P43362 315 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 BRCC3P46736 316 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR3A4PP47883 348 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 NPBWR2P48146 333 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TM4SF4P48230 202 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PTDSS1P48651 473 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACOT2P49753 483 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PGDP52209 483 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDH12P55289 794 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 VSX2P58304 361 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FGF12P61328 243 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 AMPD3Q01432 767 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 BDH1Q02338 343 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 RNASELQ05823 741 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CHRNB3Q05901 458 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PNRC1Q12796 327 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TAF10Q12962 218 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 GRM3Q14832 879 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SEPT2Q15019 361 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 IQCB1Q15051 598 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PPA1Q15181 289 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC18A3Q16572 532 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 UGCGQ16739 394 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms