RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TIMP4Q99727 224 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 ITPAQ9BY32 194 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 PFDN4Q9NQP4 134 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 UTS2RQ9UKP6 389 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 DTX4Q9Y2E6 619 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
CBX3-203ENST00000409747 ULK1O75385 1050 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 IL2RAP01589 272 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 DRD2P14416 443 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 ATP5F1P24539 256 aaPredicted RBP13.48□□□□□ -0.25
CBX3-203ENST00000409747 TIMP3P35625 211 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 MGAT2Q10469 447 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 EXOSC7Q15024 291 aaKnown RBP13.48□□□□□ -0.25
CBX3-203ENST00000409747 TESK1Q15569 626 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 NNATQ16517 81 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 SPIN4Q56A73 249 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 FNDC7Q5VTL7 733 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 VASNQ6EMK4 673 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 FAM111BQ6SJ93 734 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 ARSKQ6UWY0 536 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 IFT20Q8IY31 132 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 OR52R1Q8NGF1 315 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 METTL6Q8TCB7 284 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 ZNF675Q8TD23 568 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 ACMSDQ8TDX5 336 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 OMA1Q96E52 524 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 TMEM237Q96Q45 408 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 HBEGFQ99075 208 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 OSBPL11Q9BXB4 747 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 SHCBP1LQ9BZQ2 653 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 GIMAP4Q9NUV9 329 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 TMEM216Q9P0N5 145 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 ZNF629Q9UEG4 869 aaPredicted RBP13.48□□□□□ -0.25
CBX3-203ENST00000409747 ZNF225Q9UK10 706 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 PLLPQ9Y342 182 aa13.48□□□□□ -0.25
CBX3-203ENST00000409747 FRG2CA6NGY1 282 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PCDH7O60245 1069 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 CBX7O95931 251 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ENO1P06733 434 aaKnown RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 IMPDH1P20839 514 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 DRD5P21918 477 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PTPN6P29350 595 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PPICP45877 212 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 GSTM5P46439 218 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ASCL1P50553 236 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PKNOX1P55347 436 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 LCP2Q13094 533 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 HEPACAMQ14CZ8 416 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ANGPTL8Q6UXH0 198 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 MMP21Q8N119 569 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ADCY4Q8NFM4 1077 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 CNRIP1Q96F85 164 aaPredicted RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 ZNF681Q96N22 645 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 KLRF1Q9NZS2 232 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 FETUBQ9UGM5 382 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 FOXD3Q9UJU5 478 aaPredicted RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 CAMK2AQ9UQM7 478 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 F8P00451 2351 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 GNG14A0A1W2PPG7 69 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 GNB5O14775 395 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 SNPHO15079 494 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 TO15178 435 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 RIPK2O43353 540 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 DLX3O60479 287 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ABCB7O75027 752 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ACTL6AO96019 429 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 GSTA1P08263 222 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 CD1EP15812 388 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 BMP5P22003 454 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 UQCRC1P31930 480 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 CEACAM8P31997 349 aaPredicted RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 KIR2DL3P43628 341 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 DLX5P56178 289 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ACSM2AQ08AH3 577 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 UNC50Q53HI1 259 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ACSM2BQ68CK6 577 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 HGDQ93099 445 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 ABTB1Q969K4 478 aaPredicted RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 NTNG2Q96CW9 530 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 TMCO6Q96DC7 493 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 L3HYPDHQ96EM0 354 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PSMC3IPQ9P2W1 217 aaPredicted RBP13.47□□□□□ -0.25
CBX3-203ENST00000409747 DLGAP4Q9Y2H0 992 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 SLC6A5Q9Y345 797 aa13.47□□□□□ -0.25
CBX3-203ENST00000409747 PRAMEF25A6NGN4 478 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 OR6C70A6NIJ9 312 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 CD8B2A6NJW9 211 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 SYT5O00445 386 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 IL3P08700 152 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 PCSK2P16519 638 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 GCAP28676 217 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 EMDP50402 254 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 PRKAA2P54646 552 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 RIPPLY3P57055 190 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 RCAN2Q14206 197 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms