RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TMED10P49755 219 aaKnown RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 ACSM2AQ08AH3 577 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 WLSQ5T9L3 541 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 ACSM2BQ68CK6 577 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 MEX3BQ6ZN04 569 aaKnown RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 EIF1ADQ8N9N8 165 aaKnown RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 NEIL3Q8TAT5 605 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 C16orf78Q8WTQ4 265 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 EXOSC8Q96B26 276 aaKnown RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 C11orf24Q96F05 449 aaPredicted RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 GNRHR2Q96P88 292 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 QPCTLQ9NXS2 382 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 B4GALT7Q9UBV7 327 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 TIA1P31483 386 aaKnown RBP eCLIP17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 EMDP50402 254 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 NAGLUP54802 743 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 SPIN4Q56A73 249 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 ZNF628Q5EBL2 1059 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 EPS8L3Q8TE67 593 aaKnown RBP17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 LCORQ96JN0 433 aaPredicted RBP17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 LURAP1Q96LR2 239 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 SECISBP2Q96T21 854 aaKnown RBP17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 PFDN4Q9NQP4 134 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 EHD3Q9NZN3 535 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 CFL2Q9Y281 166 aa17.66■□□□□ 0.42
SMARCB1-204ENST00000407422 A0A0G2JNJ9 132 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 PLIN3O60664 434 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 WDR1O75083 606 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 PPM1BO75688 479 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 TRAPPC6AO75865 159 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 SNX4O95219 450 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 DRD2P14416 443 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 KRT15P19012 456 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 ADH7P40394 386 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 C1orf185Q5T7R7 199 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 GALNT18Q6P9A2 607 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 PACS2Q86VP3 889 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 OR9A2Q8NGT5 310 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 KAT2AQ92830 837 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 NTNG2Q96CW9 530 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 OMA1Q96E52 524 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 CCDC126Q96EE4 140 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 TREX2Q9BQ50 279 aaPredicted RBP17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 UBQLN3Q9H347 655 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 L2HGDHQ9H9P8 463 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 TNFRSF12AQ9NP84 129 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 KCNJ16Q9NPI9 418 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 Q9UFV3 132 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 TEP1Q99973 2627 aaKnown RBP17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 CCDC151A5D8V7 595 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 IGFBP2P18065 325 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 MASP1P48740 699 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 KRTAP10-9P60411 292 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 SPDYAQ5MJ70 313 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 FRMD7Q6ZUT3 714 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 TDRPQ86YL5 185 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 CNPY4Q8N129 248 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 LIX1Q8N485 282 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 ZNF675Q8TD23 568 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 HGDQ93099 445 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 C15orf41Q9Y2V0 281 aa17.65■□□□□ 0.42
SMARCB1-204ENST00000407422 ANKRD17O75179 2603 aaKnown RBP17.64■□□□□ 0.42
SMARCB1-204ENST00000407422 C15orf38-AP3S2A0A0A6YYH1 394 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 SERTM1A2A2V5 107 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 C2orf72A6NCS6 295 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 ANXA4P09525 319 aaPredicted RBP17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 NAGAP17050 411 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 CRHR1P34998 444 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 CCT5P48643 541 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 PLCXD2Q0VAA5 305 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 HEPACAMQ14CZ8 416 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 PRSS53Q2L4Q9 553 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 LIX1LQ8IVB5 337 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 HSPBAP1Q96EW2 488 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 NODALQ96S42 347 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 SHCBP1LQ9BZQ2 653 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 METTL7AQ9H8H3 244 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 PRODH2Q9UF12 536 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 GRID1Q9ULK0 1009 aa17.64■□□□□ 0.41
SMARCB1-204ENST00000407422 KIAA1549Q9HCM3 1950 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 GNB5O14775 395 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 ACOX3O15254 700 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 UGT2B11O75310 529 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 HPNP05981 417 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 DRD5P21918 477 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 MSX1P28360 303 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 SSTR2P30874 369 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 PPICP45877 212 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 CDK9P50750 372 aaKnown RBP17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 RPP38P78345 283 aaKnown RBP17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 CCDC153Q494R4 210 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 SEM1Q6ZVN7 128 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 ULK2Q8IYT8 1036 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 C4orf33Q8N1A6 199 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 CDC26Q8NHZ8 85 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 TMEM41AQ96HV5 264 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 GALNT9Q9HCQ5 603 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 SLC35C2Q9NQQ7 365 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 OXSMQ9NWU1 459 aa17.63■□□□□ 0.41
SMARCB1-204ENST00000407422 SIRT5Q9NXA8 310 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms