RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CD3EP07766 207 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ABCB1P08183 1280 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 RHOXF2BP0C7M4 288 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ALOX15P16050 662 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 SLC25A16P16260 332 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 KRT15P19012 456 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 CPN2P22792 545 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ATP5A1P25705 553 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 NUDT6P53370 316 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 RPS13P62277 151 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 CDK16Q00536 496 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 SNTA1Q13424 505 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 SLBPQ14493 270 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUP43-204ENST00000403890 CYP1B1Q16678 543 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 SPRED3Q2MJR0 410 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 PGGHGQ32M88 737 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ZNF672Q499Z4 452 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 FAM166AQ6J272 317 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 TMEM81Q6P7N7 255 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 C4orf22Q6V702 233 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 LMNTD2Q8IXW0 634 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ST13P4Q8IZP2 240 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 TXLNBQ8N3L3 684 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 C3orf56Q8N813 242 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 SRFBP1Q8NEF9 429 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 CALML6Q8TD86 181 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 FIG4Q92562 907 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 TANKQ92844 425 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 RIT1Q92963 219 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 VPS39Q96JC1 886 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 PELOQ9BRX2 385 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 TACO1Q9BSH4 297 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 TBCDQ9BTW9 1192 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 ACTR6Q9GZN1 396 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 PITHD1Q9GZP4 211 aaPredicted RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 RPF2Q9H7B2 306 aaKnown RBP8.32□□□□□ -1.08
NUP43-204ENST00000403890 CHODLQ9H9P2 273 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 RNF122Q9H9V4 155 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 FANCFQ9NPI8 374 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 PLSCR4Q9NRQ2 329 aa8.32□□□□□ -1.08
NUP43-204ENST00000403890 LOC100289279A0A1B0GTE1 492 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 MAGEB16A2A368 324 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 TNFRSF21O75509 655 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 ALDOAP04075 364 aaKnown RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 ITGA2P17301 1181 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 ABCD3P28288 659 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 SRD5A2P31213 254 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 GZMKP49863 264 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 EEFSECP57772 596 aaKnown RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 SNX1Q13596 522 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 ZNF793Q6ZN11 406 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 FAM214BQ7L5A3 538 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 UBE3DQ7Z6J8 389 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 UBQLNLQ8IYU4 475 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 PRR22Q8IZ63 422 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 WDSUB1Q8N9V3 476 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 C1orf54Q8WWF1 131 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 NEUROG1Q92886 237 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 ADIPOR1Q96A54 375 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 ZNF669Q96BR6 464 aaPredicted RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 DTNBP1Q96EV8 351 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 LCORQ96JN0 433 aaPredicted RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 ADAD1Q96M93 576 aaKnown RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 NDNQ99608 321 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 OSBPL11Q9BXB4 747 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 OR10A4Q9H209 315 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 GALNT9Q9HCQ5 603 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 DNAJC11Q9NVH1 559 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 WHRNQ9P202 907 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 B3GALT5Q9Y2C3 310 aa8.31□□□□□ -1.08
NUP43-204ENST00000403890 MRPS18CQ9Y3D5 142 aaKnown RBP8.31□□□□□ -1.08
NUP43-204ENST00000403890 UQCRHLA0A096LP55 91 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 MIF4GDA9UHW6 222 aaKnown RBP8.3□□□□□ -1.08
NUP43-204ENST00000403890 KIAA0513O60268 411 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 GPR75O95800 540 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 CLPSP04118 112 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 PEPDP12955 493 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 NAGAP17050 411 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 USF1P22415 310 aaPredicted RBP8.3□□□□□ -1.08
NUP43-204ENST00000403890 HIST1H1TP22492 207 aaPredicted RBP8.3□□□□□ -1.08
NUP43-204ENST00000403890 ADH6P28332 368 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 TLX1P31314 330 aaPredicted RBP8.3□□□□□ -1.08
NUP43-204ENST00000403890 SSTR4P31391 388 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 GALNSP34059 522 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 PTGDSP41222 190 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 CDKN2DP55273 166 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 SARNPP82979 210 aaKnown RBP8.3□□□□□ -1.08
NUP43-204ENST00000403890 DEFA6Q01524 100 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 AP5B1Q2VPB7 878 aa8.3□□□□□ -1.08
NUP43-204ENST00000403890 NCMAPQ5T1S8 102 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms